Acanthisitta chloris (rifleman): 103809242
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Entry
103809242 CDS
T08456
Symbol
SCAF8
Name
(RefSeq) protein SCAF8
KO
K13191
RNA-binding protein 16
Organism
achl
Acanthisitta chloris (rifleman)
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
achl03021
]
103809242 (SCAF8)
03041 Spliceosome [BR:
achl03041
]
103809242 (SCAF8)
Transcription machinery [BR:
achl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103809242 (SCAF8)
Spliceosome [BR:
achl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
103809242 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
103809242
NCBI-ProteinID:
XP_009080318
LinkDB
All DBs
Position
Unknown
AA seq
722 aa
AA seq
DB search
WETARSSEAAKENTQTTQSAAVDKSTVITTQTEAYTQPVTMLQIPVAPAVPAVSLVPPAF
PVTMSVPPPGYSPIPPPPFLRASFNPSQPPPGYMPPPVPPVVPPPVVPPPVVPPVVPTPL
VQPPLPIAQETMKDVPFTSLVLPVGTVTSNLATPTLSAGSVFNPLPISKPESDEKGSHLT
DLQISSNENSRSVQNDVSSSSGLVGGVQPPSVSSNSGLTGEGQPPTVSSSSGLAGGVQPP
SVSSSSGLGGGVQPPAVSSSSGLAGGVQLPAVSSSSSLAGGVQPTNVSSSSGLMAGVQPP
NVSSSSGLLAGVHPPSVSSSPGLLTGMQPPSVSSSSGVLAGVQPPSVSSNSGLLMMPPPN
VSSSSGLMGVPPPNISSSSGLLAMQHPAAVQNMPHLNISSQRMPGMLDPSLHPPPRGPFP
PGDIFNQTERPFGTPGRQNIDSISNPEKRLPLGGDNISQEGDRDYRFPPVENRDNLNRPS
PVDVRDSVGRPPVDPREGIGRPPVDGREHFARPHVEMRENFGRPGIDNLGRREHFGFNSD
KHWGQRGDYDEREHHAFPIYGGPKGFHEDRERFRHVNYRFDSRSGPNWNRGFEQDAHRDF
DDRRRPWERQRDRDDRDFNFCREINGNRFGRDRMSNNWIPPPHPRVFEYFDGATSQRKAD
NMPQVNGENTETESQPPTAQVQDDPELYEKLTSSVEINKEKSDTEADIESEPVVESTETE
GT
NT seq
2171 nt
NT seq
+upstream
nt +downstream
nt
agtgggaaacagcgagaagctcagaagctgctaaagaaaatactcaaactacacagagtg
ctgcagttgataagagtaccgtaattacgacacagacagaagcttacacacaaccagtca
ctatgctgcagattccagtagctccagctgtgcctgctgttagcttggttcctcctgcat
ttcctgtcacaatgtctgtgcctcctcctggttatagcccaattcctcctccacccttct
tgagagcgagtttcaacccttcacagccacctccaggctatatgcctcccccagttccac
ctgtggttccaccacctgttgtcccaccacctgttgtcccaccagttgttccaacacctt
tagtacagcctccattaccaattgcacaagagacgatgaaggatgttccttttactagcc
ttgttctaccagttggcacagttactagcaatctagctactccaacattgtctgctggaa
gtgtttttaatcctctgccaatcagcaaaccagaatcagatgaaaaaggatcacatctta
cagaccttcagatctcttccaatgaaaacagtagatctgtgcaaaatgatgtctcaagta
gctctgggcttgttggaggagtgcagccacccagtgtctcaagcaattctgggcttactg
gagaagggcagccacccactgtctcaagtagctctggacttgcagggggagtacagccgc
ccagtgtttcaagcagctctggacttggaggaggagtgcagccaccagctgtttccagca
gttctggtcttgcaggaggagtgcagcttcctgctgtttccagtagctcttctcttgctg
gcggggttcagccaactaacgtctcaagtagctctggacttatggctggagtgcaaccac
caaatgtctcaagtagctcagggcttctagctggagtgcatccacccagtgtctcaagca
gccctggccttctgacaggaatgcagccacccagtgtctcaagcagctcaggagttctgg
caggagtacaaccaccaagtgtttcaagcaactctgggcttctcatgatgccaccaccca
atgtttcaagtagttctggacttatgggagtgccaccaccaaatatttcaagtagttctg
gacttctggcaatgcagcatccagctgcagttcaaaatatgcctcatttaaatattagta
gtcaaaggatgccaggaatgcttgatccatctcttcacccaccacctcgagggccttttc
ctccaggagatatttttaatcaaacagaaagaccttttggaacaccaggaagacaaaata
tcgatagcatttctaatccagagaaaagactaccacttggaggtgataacatttcgcagg
agggagatagagattatcgctttcctccagtggaaaaccgagataatcttaacagaccat
ctccagtggatgtcagagattctgttgggcgaccgccagttgatccaagagagggtattg
gaaggcctccagtggatggaagagaacactttgcaagaccacatgtagaaatgagagaaa
attttggaagaccaggtatagataaccttggccgaagagagcattttggtttcaattcag
acaagcattggggacagagaggagattacgatgaaagagagcaccatgccttccctattt
atggtggccctaaaggcttccatgaagacagagagaggtttcggcatgtaaactataggt
ttgatagtagaagtggtcccaattggaacagaggatttgaacaagatgctcacagagatt
ttgatgaccgcagaagaccctgggaaaggcagagggatagggatgacagagattttaatt
tttgcagagaaattaatgggaacaggtttggaagagacagaatgtcaaacaactggatcc
ctcctccacatccacgggtttttgaatattttgatggggccacttctcaacgcaaagctg
ataatatgccccaggtaaatggtgaaaacacagagacagaaagtcagccaccaactgcac
aggtgcaggacgatccagaactttatgaaaaactgacatcttccgtcgagataaacaaag
agaagagtgacacagaagctgatatagagagtgaaccagtggtagaaagcacagaaactg
aggggacataa
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