Acanthisitta chloris (rifleman): 103809471
Help
Entry
103809471 CDS
T08456
Symbol
PCDH9
Name
(RefSeq) protocadherin-9
KO
K16498
protocadherin delta 1
Organism
achl
Acanthisitta chloris (rifleman)
Pathway
achl03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
103809471 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
achl01009
]
103809471 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
achl04515
]
103809471 (PCDH9)
Protein phosphatases and associated proteins [BR:
achl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103809471 (PCDH9)
Cell adhesion molecules [BR:
achl04515
]
Cadherins
Protocadherins
103809471 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
RET_CLD1
Big_9
MAP17
V_ATPase_I
EphA2_TM
RCR
DUF6249
7tm_3
Cadherin_4
DUF6377
Motif
Other DBs
NCBI-GeneID:
103809471
NCBI-ProteinID:
XP_009080553
UniProt:
A0A091NEU7
LinkDB
All DBs
Position
Unknown
AA seq
1029 aa
AA seq
DB search
MDLRDFYLLAALIACLRLDSALAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA
SLVYRLVSKAGDAPLVKVSSNTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKESQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATK
RFFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPINTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNENFVLDPYSGVIKSNVSFDREQQSSYTFDVKAVDGGQPPRSSTAK
VTINVMDVNDNSPVVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPTPNDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQSIGRFDWGTAPPTTFKPNSPDLAKHYKSASPQSAFHLKPDTPVSVKK
HHVIQELPLDNTFVGXXXXXXXTSSDHFSASECSSQGGFKTKGPLHTRQVNEHFYWSIST
AYKCPINQY
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttacctgttggccgctttgattgcctgtttaaggctggattct
gctctagctcaagaacttatttacactattagagaggagctgcctgaaaatgtacccata
gggaacataccaaaggacctgaacatttctcatatcaatgctgccacggggaccagtgcc
agccttgtctacagactggtgtctaaagcaggggatgcccctctggtcaaagtgtccagt
aatacaggggaaatctttacgacttctaacagaatagacagagaaaaactctgtgctgga
gcttcctatgcagaagaaaatgagtgtttctttgaacttgaagtggtgattctcccaaat
gacttttttaggctgatcaaaatcaaaatcattgtaaaggatactaatgacaatgcacct
atgtttccatcccctgtcatcaatatctccatcccagaaaacactctgatcaacagtcgc
tttccaatcccatcagcaacagatcctgacacaggtttcaacggtgtacagcactatgag
ttgttaaatgggcaaagtgtctttggactggatattgtagaaactccagaaggagagaaa
tggcctcagttgattgtgcagcagaacttggacagagagcaaaaggacacctacgtgatg
aaaatcaaagtggaggatggaggtaccccccagaaatccagcacagccatcctgcaagtc
acagtaagtgatgtcaatgataacaggccagtgtttaaagagagtcaagtagaggtccat
ataccagagaatgcccctgtaggcacctctgtaattcagcttcatgctacagatgcagat
ataggaagcaatgcagaaatcagatatatttttggtgcccaagttgcccctgcaaccaaa
agattttttgctttaaacaacaccacagggctgattacagttcagaggtccttagatcga
gaagagactgctattcacaaagtgacagtgctggctagtgatggtagctctacaccagcc
cgggcaaccgtcaccatcaatgtcactgatgtaaatgataaccctcctaacatagacctc
aggtacataataagccccatcaatggcacagtgtacttatctgagaaagatcccatcaat
acaaagattgccctaattacagtttcagataaggacactgatgtgaacggcaaagtgatc
tgtttcattgagagagaggtccccttccacttgaaggcagtttatgacaaccagtatttg
ttagagacctcttccttgttggactatgagggcaccaaagaattcagctttaaaattgtg
gcttctgattctggcaagcccagtttgaaccagactgccctggtaagagttaaattggag
gatgaaaatgacaaccctccgatattcagccagcctgtaattgagctgtcagtttctgaa
aacaaccgacgtggtctatacttaacaactattagtgccacagatgaagacagtgggaaa
aatgcagacattgtttatcagcttggtcctaatgcctcctttttcgatctggatcgaaag
acaggagttttgacagcctccagagtttttgacagagaagagcaggagcgtttcattttc
actgttacagcccgagacaacggcacccctcctttgcagagtcaagcggctgtaattgtt
actgtgttggacgaaaatgacaacagtcccaaatttactcataatcatttccagtttttt
gtatcagagaacttaccaaagtatagcacagtgggggtgatcacagtgaccgatgcggat
gccggggagaataaagcagtgaccctttccatcctgaatgacaatgaaaactttgtgctg
gatccgtactctggagttataaagtccaatgtttcttttgatcgagaacagcagagctct
tacacctttgatgttaaggcagtggatggagggcaacctcctcgctcttctacagcaaaa
gtaaccataaatgtgatggatgttaacgataacagccccgttgtcatctacccgccttct
aatacttcctttaagctagtgccactctcagcaattccaggatcggtggtagctgaagtc
tttgctgtggatatagacactggcatgaatgcagagcttaagtacacaattgtaagcgga
aataacaagggtttgtttcggattgatccagtgacaggtaatatcactctggaagaaaaa
ccaacccctaatgatgtggggctgcatcgcttagttgtcaacataagtgatttgggttat
cccaaatccttgcatactcttgtgcttgtatttttgtatgtaaatgatactgctggaaat
gcctcttatatttatgacttgatacgcaggactatggaaacacccttggaccggaacata
ggggacagtagccagccctaccaaaatgaggactatctcacgatcatgattgctattgtg
gcaggtgccatggttgtcatagtggtgatatttgtgacggttcttgttcgctgtcgacat
gcatcccgattcaaagctgcccagaggagcaagcaaggtgctgagtggatgtctcccaat
caggagaacaagcaaaataagaaaaagaaaaggaagaaaaggaaatctccaaagagctct
cttttgaactttgtgaccattgaggagtccaaacctgatgatgcagttcatgaacctatc
aacgggacaataagccttccagcagagctggaggagcaaagtataggaagatttgattgg
ggaacagcaccaccaacaacctttaagcctaacagtcctgatcttgccaagcattacaaa
tctgcctctccacagtctgcttttcatctcaaacctgacactccagtttcagtgaaaaag
caccatgtgattcaggaactcccgttggacaacacctttgttggtgnnnnnnnnnnnnnn
nnnnncactagttcagatcacttcagtgcctcagagtgcagttcccaaggaggcttcaag
acaaagggccccttacacaccagacaggtaaacgagcacttttactggtctataagtact
gcatacaagtgcccgatcaaccagtattaa
DBGET
integrated database retrieval system
