Acanthisitta chloris (rifleman): 103809494
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Entry
103809494 CDS
T08456
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
achl
Acanthisitta chloris (rifleman)
Pathway
achl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103809494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
achl03019
]
103809494
Messenger RNA biogenesis [BR:
achl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
103809494
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
103809494
NCBI-ProteinID:
XP_009080577
LinkDB
All DBs
Position
Unknown
AA seq
535 aa
AA seq
DB search
FADDTTGKQEDGPISGHAESAHPLQDAPQENRPVNSEDREMSQHALPSGEDDEDDSDSDS
DDDDVKVTIGNIKTGAPSYMGTPMNLNLKTGRGYGASASAKLQPKGIDLDAAGNINGLPV
IEVDLDSFEDKPWRKPGADLSDYFNYGFNEETWKAYCEKQRRLQLGLDPAPPISTENKIT
VQQGRTGNAEKEVENNIIKTEFKTDFLALVGGRMKAGPPPNRKLGGTIDVIGGQAGTIRR
VEGRRRDKHASEENPIQVLGDHGSKPQPPQQPQQPSQPQQPPQQQPFAPPAGPPPPPLAG
PPPPHFLHPPPPVTSVPPPLHPPGLPPPGPIPGLFPPPLAPPPALLIPTLDGQPASYNNR
QPPPFGYNSADSGFISYPPISTSHTPWVTTVDKGTSSSSSSHWEYSGSRRERERDRERER
ERERDRDRDRTPTTSEYNNDDERYRYYSRERSYDFERDYRRSRDRSREREERHRERRHRD
KEESSKHKSSRRKQHESEEGESHRRHKHKKNKRSKEEKEASEDGAQEGEEQDAKE
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
tttgcagatgacaccactggtaagcaagaagatggaccaatttctggacatgcagaatct
gctcatcctttgcaagatgctccccaggagaacagacctgtcaacagtgaagaccgagag
atgtcacaacacgcccttcccagtggtgaggatgatgaggacgacagcgacagtgacagt
gatgatgatgacgtgaaagtgaccattggcaacattaaaacaggagcaccatcctacatg
ggaactcctatgaatctaaacttaaaaacgggtagaggctatggagcatctgcttcagcc
aagttgcagcccaaaggtattgacttggatgctgcagggaatataaatggattgcctgtg
atagaagtggatttagattcatttgaagacaaaccgtggcggaaaccaggtgctgatctt
tctgattactttaattatggattcaatgaagaaacatggaaggcttattgtgaaaagcag
cgacgtctccagctggggctggaccctgctcctcccatcagcactgagaacaagatcacg
gttcagcaaggaagaacaggaaatgctgaaaaagaagtggaaaacaacatcatcaaaaca
gaattcaaaacagacttcttggctctggtgggaggacgcatgaaagctggccctcctccc
aacaggaagctgggtgggacgattgatgtgattgggggccaggcaggcaccatcaggaga
gtggaaggcagacgccgggataagcacgcctcggaggagaacccaatccaggtccttgga
gaccacggaagtaagccacaacccccccagcagccccagcagccatcacagccccaacag
ccacctcagcaacagccgtttgcaccaccagcaggcccaccgcctcccccgctcgctggg
cctcctccaccacacttcctccaccctcctcctccagttacttctgttccacctcccctg
catcctccaggcctgccacctccaggccctattccagggctgttcccgccacctctggca
ccgccaccagctctcctcatcccaaccttggatggccagccagccagctacaacaacagg
cagcctcctccctttggctacaactctgcagattcaggtttcatcagctacccacccatc
tccacgtcccacacgccctgggtgaccacagtggacaagggcacgagcagctccagcagc
agtcactgggagtactcgggctcgaggcgcgagcgggagcgggacagggagcgggaacgg
gagagggaacgagaccgggaccgggaccgcacccccaccaccagtgaatacaacaacgac
gacgagcgatatcgctactacagtcgggagcgcagctacgacttcgagcgcgactaccgg
cggagccgcgaccgcagcagggagcgcgaggagaggcaccgcgagcgccggcacagggac
aaggaggagagcagcaagcacaagtcctcacggcgcaagcagcacgagagtgaggagggg
gagagccatcggcgccacaagcacaaaaagaacaagcggagcaaggaggagaaggaggcc
agcgaggatggagcccaggagggcgaggagcaggatgccaaggagtga
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