Acanthisitta chloris (rifleman): 103809510
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Entry
103809510 CDS
T08456
Name
(RefSeq) YTH domain-containing protein 2-like
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
achl
Acanthisitta chloris (rifleman)
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
achl03041
]
103809510
Enzymes [BR:
achl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103809510
Spliceosome [BR:
achl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
103809510
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
OB_NTP_bind
HA2_C
HA2_N
Motif
Other DBs
NCBI-GeneID:
103809510
NCBI-ProteinID:
XP_009080593
LinkDB
All DBs
Position
Unknown
AA seq
712 aa
AA seq
DB search
KFFNALRHVTVLKTVWISKASAVQRKGRAGRCQPGVCFHLFSRLRFQNMTEFRTPELPRM
PLQELCLYTKLLAPSHCPVVDFLMKAPDPPAALTVRSAVHLLKAIDAMNPWEDLTELGYR
LTELPVEPALGKMVLYAVVLKCLDPVLTIACALACRDPFVLPAWASQRRAAMLGRKRFAA
GTFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIVGMRTQLLGQLRASGFVR
ARGGADIRDVNTNSENWAVIKAALVAGMYPNLVHVDRESLALTEPQGKKVQFHPTSVLRQ
PQCKKIPPADGQAAAIRALPTNWLIYNEMTRAHRVANIRCCTVVTSVTVSLFCGPARLPS
NALQAPPSFQGDGMSNDSSDSEMEDSSAHLALLKLDEWLHLKLDPEAAGLMLQLRQKWHS
LFLRRMQAPSKPWSQVDETIVRTITAILSAEEQSAGLQQPSGIGQRPRPVPCEELPSAST
WRSSYSRKSSAETEFSDSSNTEKVLMKSAAPVLQQPKKHKEKDILHSKGADQTSLKATDS
SSSPSPCSAAPSPISGKGSKSPSSRPNTPVRYFIMKSSNMQNLVISQQKGMWSTTPSNER
KLNSAFWESSRVYLIFSVQGSGHFQGFARMCSDIGCEKSQDWGSASFGGVFQVEWIRKES
IPFQFAHHLVNPWNDNKKVQMSRDGQELEPQVGEQLLQLWDSIPLVGKNSTD
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
aagttttttaatgcactgagacacgttacagtgctaaaaacagtgtggatttcaaaagcc
agtgctgtccagagaaaaggcagggctgggcgttgtcagcctggagtctgttttcatctc
ttcagcaggctcagattccagaatatgacggaatttcggactccagaacttccaagaatg
ccacttcaggagctttgtttgtacacaaaacttctggctccaagtcactgtccagttgta
gacttccttatgaaagctccagatcctccagctgctttgactgtgagaagtgctgtgcac
ctccttaaggcaatagatgccatgaacccgtgggaagatctcaccgaactgggttatcgt
ctcactgagctcccagtcgagccagccctgggcaaaatggtgttgtatgctgtagttttg
aagtgcctggatcctgtgctcactattgcctgtgccctggcctgcagagacccctttgtg
ctccctgcctgggcctctcagagacgtgcagctatgctggggaggaaacgctttgctgca
gggaccttcagcgaccacatggcacttctcagggctttccaggcctggcagaaggcacgg
agtgatggctgggagagagccttctgtgagaagaacttcctgtcccaagccacgatggaa
atcatcgtaggaatgagaacacaactgcttggccagctcagggcctcaggctttgttaga
gccagaggaggagctgatatccgagatgtcaataccaactctgagaactgggctgtgatt
aaagctgccctggtggctgggatgtatcccaaccttgtgcacgtggacagggagagcttg
gccttgactgaaccacaggggaagaaagtgcaatttcatccaacttctgtgctcagacaa
cctcagtgcaaaaagattcccccagcagatggacaagctgctgctatccgggcacttcct
acaaactggctcatatacaatgagatgacaagagctcacagggtagcaaacatcaggtgc
tgcactgttgtaacttctgtcactgtgtcactcttctgtggacctgccaggttacccagc
aatgctttgcaggcacctccctccttccaaggggatggaatgtctaatgacagcagtgac
agtgagatggaggactcatctgctcatctggcactgctgaagttagatgaatggctccat
ctcaaactggaccccgaagctgctggtttgatgctacagctcagacaaaagtggcacagc
ttgtttctgcggcggatgcaagctccttctaaaccatggtctcaggtcgatgaaaccatt
gtcagaacaatcacagctattttaagtgctgaagaacagtctgcaggtttgcagcagcct
tcaggaattgggcagagaccaagacctgtgccttgtgaagagcttccttcagcatctaca
tggagatcgagctacagtaggaaaagctcagcagaaactgaattctctgactcctccaat
actgaaaaagttttgatgaaatctgcggctcctgtacttcagcagccaaagaaacacaaa
gaaaaagacattttgcactccaagggagcagatcaaacatcactgaaggcgacagacagc
agtagctcccccagcccttgttctgctgctccttctcccatctctggaaagggttccaaa
tctccttcctcaagaccgaatacaccagttcggtacttcataatgaaaagtagcaacatg
caaaaccttgttatttctcagcagaagggcatgtggtccaccacacccagcaatgaacga
aaactgaactcagctttctgggagagcagcagggtttacttaatattttctgtgcaaggg
tctggacactttcagggctttgccaggatgtgttcagacataggatgtgagaagagtcag
gactgggggtctgccagttttggaggtgtgttccaggtggagtggatccggaaggaaagc
attccctttcagtttgctcaccatttggtcaacccttggaatgacaataagaaagtacag
atgagcagggatggccaggagctggaaccccaagttggagagcagttgctgcagctgtgg
gactctattcctttggtagggaaaaactcaactgactga
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