Acanthisitta chloris (rifleman): 103809525
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Entry
103809525 CDS
T08456
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
achl
Acanthisitta chloris (rifleman)
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
achl04131
]
103809525 (COPA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
achl04147
]
103809525 (COPA)
Membrane trafficking [BR:
achl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
103809525 (COPA)
Exosome [BR:
achl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103809525 (COPA)
Exosomal proteins of bladder cancer cells
103809525 (COPA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_RFWD3
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
103809525
NCBI-ProteinID:
XP_009080612
LinkDB
All DBs
Position
Unknown
AA seq
1224 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLYYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYSIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSILIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDTDSITLFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHAIMICNRKLESLCNIHENIRVKSGAWDESGV
FIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFK
LALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEI
ALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDRLSFLYLITGNLEKLRKMM
KIAEIRKDMSGHYQNALYLGDVAERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDP
EKETIPDIDPNAKLLQPPAPVMPLDTNWPLLTVSKGFFEGTIASKGKGGALAADIDIDTV
GTEGWGEDAELQLDEDGFVDAGEGFGEEGLGKGQEEGGGWEVEEDLDLPPELDVPAGPAG
GAEDGFFVPPTKGTSPAQVWCNNSQLPVDHILAGSFETAMRLLHDQVGVTNFGPYKQLFL
QTFARGRTTYQALPCLPAMYSYPHRNWKEAGLKNALPAVGLKLNDLIQRLQLCYQLTTAG
KFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLIAICREYIVGLSMEIERKKLPKDTLEQ
QKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQ
TRKILSACEKNPTDTYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYCPEFHGQI
CRVTTVTEIGKDVLGLRISPLQFR
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccaagttcgagacgaagtcggcgcgggtgaaagggctgagcttccacccaaag
cgaccctggatcctcaccagcctccacaatggagtcatccagctctgggactatcgcatg
tgcactctcatcgacaagtttgatgagcatgatggacctgtcagaggcattgacttccac
aagcagcagcctctctttgtgtctggaggagatgactacaagatcaaggtgtggaattac
aagctgcgtcgctgcctcttcactctcctgggacacttggattacatccgaaccactttc
ttccaccacgaatatccctggatcctaagtgcttctgatgaccaaaccatcagggtgtgg
aactggcagtccaggacttgtgtttgtgtgctgacaggacacaaccactacgtgatgtgt
gcccagttccacccctcagaggacctggttgtgtcagccagtctggaccagactgtgcgt
gtgtgggacatctctggcctgaggaagaagaacctttcccccggagctgtggagtctgat
gtccgtggaatcactggagtggatttgtttgggacaacggatgcagtggtcaaacatgtc
ctggagggccatgacaggggggtgaactgggctgccttccaccccaccatgcccctgatc
gtgtcgggagctgacgaccggcaggtgaagatctggaggatgaacgaatccaaggcctgg
gaggttgacacctgccgaggacactacaacaacgtgtcctgcgccgtcttccacccgcgg
caggaactcatcctcagcaactctgaagacaagagcatccgagtgtgggacatgtccaaa
cgcactggtgtccagaccttccggcgtgaccacgatcgcttctgggtgttggctgctcat
cccaacctcaacctctttgctgcaggccacgacggtggcatgatcgtgttcaagctggaa
cgcgagcgacctgcctacgccgtgcacggcaacatgctctactacgtgaaggatcgcttc
cttcgccagctggacttcaacagctccaaggatgtggctgtcatgcagctgagaagtggc
tccaagttccctgtgttcaatatgtcctacaaccctgccgagaacgccgtcctgctctgc
acgagagccagcaacctggagaacagcacttacgacctctacagcattcccaaggatgca
gactcccagaatcctgatgctccggaggggaagcgctcgtcgggcctgacagccgtgtgg
gtggcgcggaaccgcttcgccgtcctggaccgcatgcactcgatcctcatcaaaaacctg
aagaatgagatcacgaagaaggtgcaggtgcccaactgtgatgagatcttctacgctggc
acggggaacctgttgctgagggacacagactccatcaccctctttgatgtgcagcagaag
aggactttggcctcggtgaagatctccaaggtgaagtatgtcatctggtctgctgacatg
tcccacgtggctctgctggccaagcatgccatcatgatctgcaacaggaagctggagtca
ctgtgcaacatccacgagaacatccgtgtcaagagtggggcctgggatgagagtggagtc
ttcatctacaccaccagcaatcacatcaaatacgctgtcaccacgggggatcatggcatc
atccgcaccctggacctgcccatctacgtcacccgcgtgaagggcaacaacgtgtactgc
ctggacagggagtgtcgcccgcgggtcctcaccatcgaccccaccgagttcaagttcaag
ctggcactcatcaacaggaagtacgatgaggtgctgcacatggtgaggaatgccaagctt
gtgggccagtccatcattgcctacctgcagaagaaaggctacccagaggttgccctgcac
tttgtcaaggatgagaagacacggttcagcctggcactggagtgtggcaacattgagatt
gctctggaagcagccaaagctctggatgacaagaactgctgggagaaactgggagaagtg
gccttgctgcaggggaaccaccagattgtggagatgtgctaccagcgcaccaagaacttc
gacagactctccttcctctacctcatcactggcaacctggagaagctgcggaagatgatg
aagatagctgagatccgcaaagacatgagtggtcactaccagaacgccctgtacctgggg
gatgtggctgagagagtgaggatcctgaagaactgtgggcaaaagtccttggcctatctc
acagctgccactcatggtctggatgaggaagctgaaagcctgaaggaaacctttgatccc
gaaaaggaaacgatcccagacatcgaccccaatgcgaagctgctgcagcctcctgctcct
gtcatgcccttggacaccaactggccactgctgactgtctccaagggcttcttcgaggga
accattgctagcaaaggcaaaggaggagccttggccgccgacattgacatcgacacggtg
ggcacggagggctggggagaggatgcagagctgcagctggatgaagatggctttgtggat
gctggagaaggctttggagaggaaggtctgggcaagggacaggaagaaggaggaggatgg
gaagttgaagaagatttggatcttccacctgaactggatgttcctgctgggcctgcagga
ggagcagaggatggattctttgtgcctcccaccaagggcaccagcccagcccaggtgtgg
tgtaacaattcccagctgcctgttgaccacatcctggcaggttcctttgagacagcaatg
aggctcctccacgaccaggtgggagtgacaaactttgggccctacaagcagctgttcctg
caaacctttgcccgtggccgcacgacctaccaggccctgccgtgtctgcctgccatgtat
agctacccacaccgcaactggaaggaagctggcctgaagaatgccctcccagctgtgggc
ctgaagctcaacgacctgatccagcgcctgcagctctgctaccaactcaccactgccggc
aagttcgaggaggccgtggagaagttccgctccatcctgctcagcgttcccttgctggtg
gtggacaacaagcaggagattgctgaggcccagcagctcattgccatctgccgtgagtac
atcgtggggctctccatggagatcgagcgcaagaagctgcccaaggacactctggagcag
cagaagagaatctgtgagatggctgcctacttcacccactccaacctgcagcctgtgcac
atgatcctggtgctgagaactgctctcaacctcttcttcaagctcaagaacttcaagaca
gcagcgacgttcgcccggaggctgctggagctcggccccaagcctgaggtggcccagcag
acgcgcaagatcctgtcggcgtgtgagaagaatcccacagacacctaccagctcaactac
gacatgcacaacccctttgacatctgtgctgcctcctacagacccatctaccgtggcaaa
cccgtggagaagtgtcccctcagcggggcctgctactgcccagagttccatgggcagatc
tgccgcgtcactacggtgaccgagatcggcaaagacgtcctggggctgcgcatcagcccc
ctccagttccgctag
DBGET
integrated database retrieval system
