Acanthisitta chloris (rifleman): 103809987
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Entry
103809987 CDS
T08456
Name
(RefSeq) LOW QUALITY PROTEIN: hemicentin-1-like
KO
K17341
hemicentin
Organism
achl
Acanthisitta chloris (rifleman)
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
achl04990
]
103809987
Domain-containing proteins not elsewhere classified [BR:
achl04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
103809987
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
V-set
C2-set_2
VWA_4
Ig_4
C2-set_3
GBD_Hemicentin
Receptor_2B4
Motif
Other DBs
NCBI-GeneID:
103809987
NCBI-ProteinID:
XP_009081115
LinkDB
All DBs
Position
Unknown
AA seq
2871 aa
AA seq
DB search
IGPVTITTDPKKFQFELRELYVQGGGDCPEMSIGAIKIALEISLPGSFIYVFTDARSKDY
RLTHEVLQLIQQKQSQVVFVLTGDCDDRDHIGYKVYEEIASTSSGQVFHLDKKQVNEVLK
WVEEAVQASKVHLLSTDHLTMAVNTWQIPFDPSLKEVTVSLSGPSPAIEIHDPLGKQLSK
GSGLNELLNIHNSAKVVNVKDPEPGTWTIKTSSSGRHSVRITGLSTIDFRAGFSRKPTLD
FKKTSSRPVQGIPTFVLLNTTGILLPARVDQLELLSITGELLKTLPVKYYPDRKPYGLWN
ISHFIPPDEAFFVKITGYDKDDYLFQRVSSVSFSSITPDAPKVTMPIKTPGYYLQPGSVP
CHVESLIPFTQRFTKNGVKLGVDQFFKESSSMSWEIAQVSLADEGFYECMASSSAGTGRA
QTFLDVSEPPPVIEVPNNVTVVPGEGAILTCLALSSVRYNLTWQRQGRDARVGGPLRVRV
MSNLSLEVKAVRLTDAGRYDCIAANEGGSTTASVFLTVQEPPRLVISPKNQTFTEGSEVS
IRCSATGYPKPRVVWTHNDMFIIGSNRYRLAPEGTLTIRKAIPKDAGIYGCLASNSAGTE
KQTSTLTYIEGPTLTVVQSEILVGLGDTTVMECKTTGIPPPQVKWFKGDLELRASAFLII
DTHRGLLKIQETQDLDAGDYTCVAANDAGRASGKITLDVGSPPVFTQEPSDESADLGSNL
TLPCYVQGYPEPKVKWRRLNGASLFSRPFAVSSVTQLRTGALSIHNLWVSDEGTYVCEAE
NQFGRIQSRPATVTVTGLVTPLIGASPATANVIEGQQLSLPCVLLAGNPIPDRRWIKNRM
VLVPNPYVSVRGDGSLHLERVRLQDGGDYTCMATNVAGTSNRTTTVNVYVLPVIQHGQQI
FSTIEGIPVTLPCKASGVPKPTIVWSKKGEVILASNVKFSAGSDGSLYVVSPGGEETGEY
ACTATNAAGYATRKVQLTVYVKPRVSRPGDQQGHDKPIEISVIAGEDVTLPCEVKSLPPP
IITWAKEMQLISPFSPRHTFLPSGSMKISETQVSDSGMYICVATNIAGNVTQSVKLSVHV
PPKIQRGPRVLKVQAGQRAELPCSAQGIPAPSVSWFKGRSAVPIGGGQFSQGLDGALSIS
SVQLPDAGVYKCVARNAAGSDAAEITVQVQESPTIEGLDPPYNSPFQERVANQRIAFPCP
AKGTPKPVIKWLHNGRELTGSEPGVSVLEDGTLLVIAAVTPADNGEYVCVATNEAGSTER
KYNLKVHVPPDIRDQEKVTNTSVVVHHPVSLFCEVTGNPFPVISWYKEDTQVVESSALQI
LHNGKILKLLKAATEDAGQYSCKAINVAGSSEKLFNLDILVPPSIIGAESPGEITVVLNQ
EISLECRAKGFPFPDVHWFKDGKPLFLGDPNVELLDKGQVLHIKNARRVDKGRYQCSATN
TAGKQVKEVKLIVHVPPSIKGGNLTTEVSALLNNLINLECEAKGIPVPTITWFKDGHPVS
SSPQAVYVERGQFLRIPRAQASDSARYTCRVSSAAGAAEKVYDVDVYVPPVIEGDADTAQ
SRQVVAGNSLTLECKAAGNPPPLLTWLKDGVPVEASDRLRVLAGGKKLEILNVVEADRGQ
YWCVATSIAGEQEIKYEVEILVPPFVDGGDELLDYIVVLHSPLELDCSAAGTPSPTITWL
KDGQPVEEGAGHKILLNGQKLLISQALVSDTGHYKCVAANKAGEHGKEFDVTVHVPPTIK
STGPSERAVVIHKPVMLQCIASGIPSPSITWLKDGQPVNTARGNIRLESSGRVLQVGQAL
LEDAGQYTCVATNAAGEAQQHVRLHVHEPPRLEDEGKMLNETVVVNNPIHLECRASGNPL
PAISWYKDNHPMGSAGSAPVLGRGQVLQLEAAQISDTGVYRCVAANSAGTAQLSYSLQVH
VPPSISGSSDMVTVVVNNLVRLECEARGIPAPILTWLKDGSPVSSFSNGLQVLSGGRVLA
LPSAQISDTGRYTCVAVNAAGESQRDIDLRVYVPPDIMGEEQNVSVLVGQAVELLCQSNA
IPRPVLTWLKDGQPLLKKPGLSISGDGSVLKVEGAQVQDTGRYTCEATNVAGKTEKNYNV
NIWVSPSIYGSDDSSQLTVTEGNLISLICESSGIPPPSLTWKKNGSALVADPSGRVRLLS
GGRQLQISVAEKSDAASYTCVASNVAGSASKEYSLQVYIRPSISNSGSHPSEVIVTQGSE
VSLECEAQGIPEPAVTWMKDGHALASGRDVSVLQGGHILQLKRAQVSDTGRYVCVAANLA
GLSDRKYDLHVHVPPSIAGYLQMPENISIVEKNPISLVCEASGIPLPAITWLRNGWPVTL
NNSVRILSGGRTLRLTHTSVGDTGRYTCVVTNAAGEVRKDFDLSVLVPPGIVGENRLEDV
KVKEKHSVTLVCEVIGTPVPQITWVKDGQTLAEDGDHRLLSSGRSLQVTHARVTDTGRYT
CVASNAAGERSKTYSLNVLVAPSIVGADSHGNAEDVTVILNSPTSLVCEAYSYPPATITW
LKDGNPLESNRNIRILPGGRTLQILNAQEDNAGRYTCIATNEAGETLKHYEVKVYIPPTI
ARGDVSGTGLSPKEVKIKLTRECEAHAIPAAAISWFKDGQPFKADNHVLIQAGGRALHIK
EAQVSDTGRYTCLASNIAGEDELEFDVNIQVPPSFQKPYRDWEAGNTVDAGRGGESKDVI
VNNPLSLYCETNAVPPPVLTWYKDGYPLSSSDRVLILPGGRVLQIARAQAEDAGTYTCVA
VNEAGQDSIQYHVCVLLPPSISGAERDLPEEVTVLLGQVSAMDCVASGNPSPGITWHKDG
QLLAEDDKHTFLSNGRRLQILNSQITDTGRYVCIAENTVGSAKKYFNLNVH
NT seq
8616 nt
NT seq
+upstream
nt +downstream
nt
aaattggcccagtgaccataaccacagatcccaagaaatttcagtttgaactcagggaac
tttatgttcagggtggtggagactgtccagagatgagcattggggcaataaagattgctc
tagaaatttccctgcctggttctttcatctatgtgtttactgatgctcgatccaaggatt
acagactaacccatgaagtgcttcaactcatccagcagaaacagtcacaggtggtatttg
tgctgactggagactgtgatgacagggatcatattggttacaaggtctacgaagaaattg
cctccacgagttctggtcaagtttttcacttggacaaaaaacaagttaatgaggtgttaa
aatgggttgaagaagcagttcaggcctccaaagtgcatctcttgtctacagaccatctga
ccatggctgtgaatacttggcagatcccttttgatccgagtctgaaagaggttacagtgt
ccctgagtggtccctcaccagcaattgagattcatgatcctttaggcaagcagctcagta
aaggatcaggtctgaatgaattgctaaatatccacaactctgcaaaggtagtaaatgtca
aagatcctgagcctggaacgtggacaattaagacctcgagcagtggaagacactccgtcc
ggatcacagggctcagcaccattgacttccgcgctgggttctccaggaagccaacgctgg
acttcaaaaaaacatccagcagacctgtgcaagggattcctaccttcgtgctgctgaata
ccacggggatcctgcttcctgctagggtagaccaactggagcttctgagtattacagggg
aacttctgaagaccttgcctgtgaaatactatcccgacagaaaaccctatggactgtgga
atatttctcacttcattccaccagatgaagctttttttgttaaaataacaggctatgaca
aggatgattatctcttccagagagtttcaagtgtttcattttccagcattactcctgatg
ctccaaaagtgacaatgcccatcaagactccaggctattatttgcagccaggctctgttc
cttgccatgtggaaagcctgataccttttactcagcgttttactaaaaatggggtaaaac
taggagtggatcagttcttcaaagagtcatccagtatgagctgggagattgcccaggtct
ccttggctgacgaaggcttttatgagtgcatggcgagcagcagcgccgggacggggcgag
cacagacctttctggatgtctcagagcctcctcctgtgattgaggttcccaacaatgtca
cagtcgtgcctggggaaggagccatcctgacctgcctggccctgagctcggtgcgctaca
acctgacgtggcagcggcaggggcgggacgccagggtgggggggccgctgcgggtgaggg
tgatgagtaacctgtctctggaggtgaaggctgtcaggctgacagatgctggaaggtacg
actgcatcgctgctaacgagggtggatccaccacggcctcagtcttcctcaccgtgcaag
agccacctaggcttgtcatttcacctaagaatcagactttcacggaaggctctgaagtgt
ccatcaggtgttctgcaacaggttatcccaagccaagagttgtgtggacacacaatgaca
tgttcatcattggttcaaacaggtatagattggcccctgaaggcaccttaaccataagaa
aggcaattcccaaagatgcaggaatttatggctgcttggccagtaactcagctgggacag
agaaacagacatccaccctcacctacatcgagggcccaacactgactgtagttcagagtg
aaattctggttggtcttggagacacaacagttatggagtgtaaaacaactggcatcccac
cccctcaagtgaaatggtttaaaggtgacttagagttgagggcatcagcatttctcatta
ttgatactcatcggggccttctgaagatccaggaaacacaagacctggatgctggtgact
atacctgtgtggctgccaacgatgcagggagagcttctggcaagataactctagatgttg
gctctcccccagttttcacacaggagcccagcgatgagtctgcagatcttggctccaacc
tcaccctgccatgctacgtgcagggctacccagagcccaaggtcaagtggcggcggctga
acggagcttctctcttctccaggccgttcgccgtcagttccgtcacacagctcaggacag
gagcactgtctattcacaatttgtgggtcagtgatgaagggacttatgtctgtgaagctg
agaaccagtttggaaggattcagtcccggccggccacggtcacagtgactggcctggtca
cacctttgattggagcaagcccagccacggccaatgtcattgagggccagcagctctctc
tgccatgtgttctgctcgctgggaatcccattccagaccggagatggattaaaaaccgta
tggtgctggttcccaatccctatgtcagtgtccgtggtgatgggagcctgcacctggaaa
gggttcggctgcaggatggaggggattacacctgcatggccaccaatgtggctgggacca
gcaacagaaccaccactgtgaatgtctatgttctgcctgtcattcagcatggacagcaga
tattcagcaccattgaagggatcccagtaacactgccctgcaaagctagtggagttccca
agccaaccattgtctggtccaagaaaggagaagtcattcttgccagcaatgtgaagttct
ctgcagggtcagatggaagcctgtatgtggtttccccagggggtgaagagactggggaat
atgcatgtactgcaaccaacgctgctggctacgccacccgcaaagtccagctgactgtct
acgtgaaacctagagtgtccaggcctggagaccagcaaggacatgataaacccatagaga
tctcagtaattgcaggggaagatgtcacacttccatgtgaagtgaagagcctcccacccc
ccataattacttgggccaaagaaatgcagctcatatctccgttctctccaagacacactt
tcctaccctcagggtcaatgaagatcagtgagacccaagtttcagacagtggaatgtata
tctgtgtcgccacaaatatcgctgggaatgtgactcagtcagtgaaactgagtgtgcatg
ttcctcccaagatccagcgtggacctcgagtgctgaaggtccaggctgggcagcgagcgg
agttgccctgcagtgcccagggcatccctgccccgtcagtctcctggttcaaaggcagga
gtgctgtgcccataggtggtgggcagttctcccagggcctggatggagctctcagcatca
gcagtgtgcagctccctgacgctggggtctacaagtgtgtggctcggaacgccgcgggca
gcgacgccgcggagataacagtgcaagtgcaagagtctcccacaattgagggcctggacc
ctccatacaacagtcccttccaagaaagagtggcaaaccagcgcatcgcgttcccctgtc
ctgccaaaggtactccgaagcctgtcatcaagtggctgcacaatggcagagagctgacag
gcagtgagccaggggtctcagtgctggaggatgggacactgctggtcatcgctgctgtca
cacctgcagacaatggggagtatgtctgtgtggcaaccaacgaggctgggagcacagaaa
ggaagtacaacctgaaagttcatgttcctcctgacattagagaccaagaaaaggtgacaa
atacatctgtggtggttcatcaccctgtcagtctcttctgtgaagtaactggtaacccct
tcccagtcatctcctggtataaagaagatacccaggttgtggaaagcagtgctctccaga
ttttgcacaatgggaagatcctgaagctcctgaaagctgctactgaggatgctggacaat
actcctgcaaagccataaatgtagcaggaagttctgagaagctgtttaacctagatatac
tagttccacccagcataataggtgctgagagccctggtgagattacagtcgtcctcaacc
aggaaatcagtctggaatgcagagccaaaggtttccctttccctgacgttcactggttca
aagatggcaagcccttgtttttgggtgatcccaatgttgagcttctggacaaaggtcaag
ttctccacatcaagaatgctcgaagggttgacaaaggtcgttaccagtgcagtgccacca
acactgctggcaagcaagttaaggaggtcaagctgattgtccatgtccctcctagtatta
agggaggaaatctgaccacagaggtgtcggcgcttctcaacaaccttataaacctggagt
gtgaggccaagggaatccctgtgcccaccatcacctggttcaaggatgggcaccctgtct
cctccagcccccaggctgtgtacgtggagcgggggcagttcctgcggatcccgcgggcgc
aggcgtcggactctgccaggtacacgtgccgtgtgagcagtgctgctggggctgctgaga
aggtgtacgacgtggatgtgtacgttcctccagtaatcgagggcgacgctgacacagccc
agagcaggcaggtggttgctgggaattcactgaccttggagtgtaaggctgctggcaacc
ctccccctctcctcacctggctgaaagatggggttcctgtggaagcaagtgacaggcttc
gtgttctggctggtgggaagaagctggagatcctgaacgttgtcgaggctgaccgaggcc
agtattggtgtgtggccacaagcatagctggagaacaagaaatcaagtatgaagttgaaa
tcttagtcccacccttcgtggatggtggagatgagctcttggactacattgtggttctcc
atagccctttggagctggattgctcagcagcagggacaccctcaccaactatcacgtggt
tgaaagatggccaaccagttgaagagggagctggacacaagatcttattgaatggacaaa
agctcctcatctctcaagctctagtgtcagacactggtcactataaatgtgtggcagcaa
acaaggcaggagaacatgggaaggaatttgatgtcacagtgcatgttcctccaaccatca
agtcaactgggccttctgagagagctgttgtgatccacaagcctgtgatgctgcagtgca
tagccagtggcattcccagcccttccataacctggttaaaagatggacaaccagtaaata
cagccagaggaaatatcagactggagtcttcaggccgtgttctgcaggttggccaggccc
tgctggaagatgctggccagtacacttgtgtggcaacaaatgctgcaggagaagcccaac
agcacgttcggcttcacgtgcatgaaccacccagactggaagatgaaggaaaaatgttaa
atgaaactgtggtggtgaataatccaatccatcttgagtgcagagcatctgggaaccctc
tgccagctatctcgtggtacaaggacaaccatcccatgggcagtgctggcagtgcccccg
tgctgggccgggggcaggtcctgcagctcgaggcagctcagatctccgacacgggcgttt
acaggtgtgtggctgccaactcggcgggcacggcccagctctcctacagcctccaggttc
atgtgcccccatcgatctctggcagcagtgacatggtgacagtggtggtgaacaatctgg
tgcgactggagtgtgaagccagaggcatccctgcccccatcctgacatggctaaaggatg
gcagccctgtgtccagcttcagcaatggactccaggttctgtctgggggcagagtcctgg
ccctgcccagtgctcagatcagtgacacagggaggtacacgtgtgtcgcagtcaacgccg
cgggcgagagccagagagacatcgacctccgcgtctatgttcccccagacatcatgggag
aggagcagaacgtctcggtgctcgtcggccaggccgtggagctgctgtgccagagcaatg
ccattccccgccccgtgctgacctggctcaaggatgggcagcccctgctgaagaagccag
ggctgagcatctctggtgatgggagtgtgctgaaggttgaaggagctcaggtgcaggaca
ctggccgctacacctgtgaggcaaccaatgtggctgggaaaactgagaagaactataatg
tcaatatttgggtgtcaccaagtatttatggctcagatgacagctcccaactgacagtga
ctgaagggaacttgataagcctgatctgtgagtccagtggcatcccaccacccagtctca
cctggaaaaagaacggctctgctctggtggctgacccgtcggggcgggtgcgactcctgt
ctgggggcagacagctgcagatctcagttgctgagaaatctgatgctgcatcttacacct
gtgttgcttcaaacgtggctggaagtgccagcaaagaatacagcttgcaagtgtacattc
gaccgtctatatcgaacagtggctcccacccatcagaagtcattgtcacccagggaagtg
aagtgtccttggagtgcgaggcacagggcattccagagccagcagtgacctggatgaagg
atggacatgcactggccagtggaagggatgtgtcagtacttcagggtggtcacattctcc
agctgaaacgtgcccaggtgtcggacaccggtcgctacgtctgcgtggctgctaacctgg
ctgggctgtctgacaggaaatatgacttacatgttcatgtgcccccaagtattgctggtt
acctgcagatgcctgaaaacatcagcattgtggagaagaaccccatctctctggtttgtg
aagcttcagggattcccttgccagcaataacgtggctcaggaatggatggcctgtcactc
tgaacaactcggtgcgaatcctctcaggtggccgaacgctgcggttgacacacacgagtg
tgggggacacaggtcgatacacctgtgtggtgaccaatgctgcaggagaagtgaggaagg
attttgacctttctgtccttgtgcccccagggattgtgggggaaaacagactggaggatg
tgaaagtgaaagagaagcacagcgttaccctggtgtgtgaagtgataggaacccctgtgc
cacagatcacctgggtgaaggatgggcagactctggctgaggatggggatcacaggctgc
tgtccagtggccgttccctgcaggtcacccacgctcgggtcacggacacggggcgataca
cgtgtgtcgcgtccaacgcggccggcgagaggagcaaaacttacagcctcaacgtcctcg
tggctccaagcatcgtgggtgcagacagccatgggaatgcagaagatgtcactgttatcc
tcaacagcccaacctcactggtctgtgaggcttactcataccctccagctaccatcacct
ggctgaaggatgggaatcccttggaatcaaacagaaacattcgcattttgccaggtggga
gaactctgcagatcctgaatgcccaggaggacaatgctggcagatacacctgtatagcca
caaatgaggctggagaaactttgaagcactatgaagtgaaagtctacattccccccacca
ttgccagaggggatgtctcagggactggtctctcccctaaggaagtgaagatcaaactga
cccgtgagtgtgaagctcatgccattccggctgctgccatcagctggttcaaggatggac
agccatttaaagcagacaatcatgtcctgatccaagctggtggccgtgctctgcacatta
aggaggctcaagtgtcagacactggtcgttacacttgtttggcatccaacattgctggag
aggatgagctggagtttgatgtaaatatacaagttcctcccagtttccaaaagccttaca
gagattgggaagctgggaacacagtggatgcaggaagaggtggagaaagtaaagatgtga
ttgtcaacaatcccctgtccctgtactgtgagaccaatgctgttcctcctcctgtgctta
cgtggtacaaggatggttatcccctgagctccagtgacagggtgctcatcctgccaggag
gcagagtgctgcagatcgcccgggcgcaggcggaggacgccgggacgtacacgtgtgtgg
cagtcaatgaggctgggcaggattccatccagtaccatgtctgcgtgctcttgccgccgt
ccatcagcggcgccgagcgcgacctgcccgaggaggtgaccgtgctgctgggacaggtct
cagccatggactgtgtggcaagtgggaacccttcccctggcatcacctggcacaaggatg
gacagctcctggcagaagatgacaaacacacctttttgtcgaacggaaggaggttacaga
tactgaattcccaaataacagacactggcaggtatgtctgcattgcagaaaacacagttg
gaagtgccaagaagtattttaacctaaatgttcatg
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integrated database retrieval system
