Acanthisitta chloris (rifleman): 103810011
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Entry
103810011 CDS
T08456
Symbol
HMBOX1
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
achl
Acanthisitta chloris (rifleman)
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
achl03000
]
103810011 (HMBOX1)
Transcription factors [BR:
achl03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
103810011 (HMBOX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
DUF494
HTH_24
CUT
HTH_37
HTH_26
HTH_31
HTH_23
Motif
Other DBs
NCBI-GeneID:
103810011
NCBI-ProteinID:
XP_009081139
LinkDB
All DBs
Position
Unknown
AA seq
454 aa
AA seq
DB search
MLRTFPVVLLETMSHYTDEPRFTIEQIDLLQRLRRTGMTRHEILHALETLDRLDQEHSDK
FGRRSSYGGGSYSNSTNNVPASSSTATASTQTQHSGMSPSPSNSYDTSPQPCTTNQNGRE
SNERLSAFNGKMSPTRYPLANSLAQRSYSFEASEEDLDIDDKVEELMRRDSSVIKEEIKA
FLANRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTNPGATLSMR
PAPIPIEEPEWRQTPPPVTATSGTFRLRRGSRFTWRKECLAVMESYFNENQYPDEAKREE
IANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIAAILESHGIDVQSPGG
HSNSDDVDGNDYSEQDTWQVRNGEEEGRCSEGGREAEKVEEDRRICSKQDDSTSHSDHQD
PISLAVEMAAVNHTILALARQGANEIKTEALDDD
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgctcagaacttttccagtagttctgctggaaaccatgtctcactacacagacgaacca
agatttaccatagagcagatagacctgcttcagcgcctcagacgaacgggaatgaccagg
catgaaatcctccacgcgctggaaaccttggatcgtcttgatcaagagcatagtgacaag
tttggaagaaggtctagctatggaggtggttcctacagcaacagtaccaacaatgtccca
gcatcttcctctacagccacagcttcaacacagacccaacactctgggatgtccccatca
ccgagcaacagttacgacacctccccacagccttgcactactaatcagaatgggagggag
agtaacgagaggttgtctgcattcaatgggaagatgtcgcccacccgctacccgctggca
aacagcttggctcagaggtcctacagctttgaagcttctgaagaggacttggacattgat
gacaaagtggaggaactgatgaggagggacagcagtgtgataaaggaggaaatcaaagcc
ttcctagccaatcggagaatttcccaagcagttgttgcacaggtaacaggtatcagccag
agccgcatctcccattggctgttgcagcaggggtcggacctcagtgaacaaaagaaaagg
gcattttacagatggtaccagcttgagaagacaaatcctggggctacattaagcatgaga
cctgctcccatcccaatagaagagccagaatggagacagacgcctcccccagtcacagct
acctctgggaccttcagactacggcggggcagtcggttcacatggagaaaggagtgcctg
gctgttatggaaagttacttcaatgagaatcaatatcctgacgaggcaaagagagaagaa
attgccaatgcctgtaatgcagttatacagaaaccaggaaagaagttatcggatttggag
cgagttacctcccttaaggtgtataattggtttgccaacaggaggaaggaaatcaagaga
agagccaatatcgcagcaatcctggagagccatggaatagatgtacagagtccaggaggt
cattccaacagtgatgacgtggatggcaatgactactcagagcaggacacttggcaagta
cgcaacggggaggaggagggaagatgttcagagggaggcagagaagcagagaaggtagaa
gaagacaggaggatctgctccaaacaagatgacagcactagccatagtgaccatcaagac
cccatttcactagccgtggagatggcagcagtcaaccacaccatcttggcgctggcccgg
caaggagccaacgagatcaagacagaggctctcgacgacgactga
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