Acanthisitta chloris (rifleman): 103811173
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Entry
103811173 CDS
T08456
Name
(RefSeq) protocadherin beta-1-like
KO
K16494
protocadherin beta
Organism
achl
Acanthisitta chloris (rifleman)
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
achl04515
]
103811173
Cell adhesion molecules [BR:
achl04515
]
Cadherins
Protocadherins
103811173
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
RibLong
SGBP_BT4661-like
HemS
Motif
Other DBs
NCBI-GeneID:
103811173
NCBI-ProteinID:
XP_009082374
LinkDB
All DBs
Position
Unknown
AA seq
442 aa
AA seq
DB search
MTLILLLCISGVTAETARYSVPEEMERGSFVANIAKDLGLTGEELLARQARLVPEGEKQY
LQLNQHSGDLVVREQMDREELCGQSDPCLLRFEVLLESPLQSFRAEVSLTDINDHAPVFL
NKEIVLKIPESALPETRFLLESAQDPDVGNNSLQHYSISSNEYFRIYTRRRSDRRRYAEL
VLDRALDREQQAEVVFSITAVDGGTPPRSGTALIRVVVLDINDNIPLFTRSLYKVSVKEN
SPQDTLVVAVSASDLDSGTNGEITYSIVQNSEENLETFKINPETGQIRLKKPLDYEETKT
YEIDVQATDGGGLSAHCMVEVQVEDVNDNAPEVIITSLTSTLSEAAPLNTVVALFNVRDR
DSGNNGRTTCELPGEQPFSITPLAADAYALVTSEALDREQVAEYNVTVRARDEGSPALSA
SKILLVRLLDVNDNAPTFTQAI
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgactctgatccttctcctttgcatctcgggggtgacagcagaaaccgctcggtactct
gtgcctgaagagatggagagaggctcctttgtggcgaatatcgctaaggatttgggactg
accggtgaagaattattggctcgtcaggctcgactcgttcctgaaggagaaaagcagtat
ttacagctgaaccagcacagcggggatttggtggtgagagagcaaatggaccgggaggag
ctgtgcggacagagcgatccctgcctgctgcgtttcgaggtgctgctggagagcccactg
cagtccttccgagctgaggtaagcctcaccgacataaatgatcatgctcctgtgttctta
aataaagagatagttttaaagatcccggaatctgcattgccggagactcgatttttgttg
gaaagcgctcaggatccagatgtaggaaacaatagtcttcagcattatagtatcagctcg
aacgagtattttcgtatctacacccggcggcggagtgaccgtaggaggtatgccgagctg
gtgttggatcgagccctggacagggagcagcaggcagaagttgttttcagcatcacggct
gtggatggtgggactccaccgcgctcgggtacagccttaatccgtgtggtagtcctggat
ataaatgacaacatcccattatttaccaggagtctgtataaagtttctgtaaaggaaaat
agcccccaggatactttagtggtggcggtgtctgctagcgatttagactcgggaacaaac
ggagaaataacctattctatagttcaaaattcagaggaaaatctcgagacgtttaaaata
aatccagagacaggtcagattcgactcaaaaagcctttggattatgaggaaacaaagaca
tacgagatagacgttcaggccacagatggagggggtctgtctgcacactgcatggtggaa
gtgcaagtggaggacgtgaacgacaatgcccccgaggtgatcatcacctctctcacgagc
accctgtctgaagctgcccctctgaacaccgtggtggccctcttcaacgtgcgggaccgg
gactcggggaacaacggcaggacgacatgcgagctgccaggtgagcaacccttcagcatc
actccgctggcggccgatgcgtacgcgctggtgacatcagaggctctggacagggaacag
gtggcggagtacaacgtgacggtgcgagcccgcgacgagggctcccccgcgctctcagca
tccaagatactgctcgtgcggctcttggatgttaacgacaacgcgcccaccttcactcag
gccatttaa
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