Acanthisitta chloris (rifleman): 103811635
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Entry
103811635 CDS
T08456
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
achl
Acanthisitta chloris (rifleman)
Pathway
achl03020
RNA polymerase
achl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
103811635 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
103811635 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
achl03021
]
103811635 (POLR2B)
03400 DNA repair and recombination proteins [BR:
achl03400
]
103811635 (POLR2B)
Enzymes [BR:
achl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
103811635 (POLR2B)
Transcription machinery [BR:
achl03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
103811635 (POLR2B)
DNA repair and recombination proteins [BR:
achl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
103811635 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
103811635
NCBI-ProteinID:
XP_009082868
LinkDB
All DBs
Position
Unknown
AA seq
1167 aa
AA seq
DB search
MQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPIDL
QAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAPLYVD
ITKTVIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLDPGGYFII
NGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSMLARGGQGA
KKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEMVKPSLDE
AFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGY
MVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGK
DFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNS
PIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEE
WSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSEVSMIRDI
REREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASGVVEYIDT
LEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSA
MGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIVAIASYTG
YNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGYDQEEVFEKPTRETCQGMRHAIYDK
LDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRFTKRDCSTFLRTSETGIVDQV
MVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEGITPDIII
NPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGYHLRGNEV
LYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSRDGGLRFG
EMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQIS
LVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgcagtatgatgaagatgatgatgaaatcactcccgatttgtggcaagaagcctgctgg
attgtcattagctcctattttgacgaaaagggtttagtcaggcaacagttggattctttt
gatgagtttatccagatgtctgtgcagagaattgttgaagatgctccaccaattgattta
caggctgaagcccagcatgcctcaggagaagtggaagagccgccccggtacctactgaag
tttgaacaaatctatctttctaaacctacacattgggaaagagacggagcaccttcacct
atgatgcccaatgaagccagactgagaaaccttacgtattcagccccgttgtatgtggat
ataactaaaactgttattaaagaaggggaggaccagttacagacacagcatcagaaaacc
tttataggaaaaattcctattatgttacgttccacatactgtttgttgaatggcttaact
gaccgtgatctctgtgaactgaatgaatgcccacttgatcctggtggctactttattatt
aacggatcagaaaaggttctgattgctcaagagaagatggctacaaacacagtgtatgtg
tttgcgaagaaagattcaaaatatgcctacacaggagagtgtaggtcttgcctggaaaat
tcctctcgaccaacaagtactatatgggttagcatgctggccagaggtgggcagggtgca
aagaagagtgccattggtcagcgcattgtagccactttgccatacatcaaacaagaagtt
cccatcataattgtcttccgtgcacttggctttgtgtccgacagggacattttagagcac
attatatatgattttgaagatccagaaatgatggaaatggtcaaaccttctctggatgaa
gcatttgtcattcaggagcaaaatgttgctctaaacttcattggctcaagaggtgcaaag
ccaggtgtcaccaaagaaaagagaatcaagtatgctaaagaagtcttgcagaaagaaatg
ctcccacatgttggtgtcagtgacttctgtgaaaccaaaaaagcctattttctagggtat
atggttcatagattgctcttggcagcactgggaagaagagagctggatgacagagatcat
tatggcaacaaaagactggatcttgctgggccactgttagctttcctgttcagaggaatg
tttaagaatttgctgaaggaagtgagaatatatgcacaaaagtttattgatagagggaaa
gatttcaacttggaattggcaattaaaacaagaattatttcagatggtttgaagtattca
ttggcaactggaaactggggtgatcagaagaaagctcatcaagccagagcaggagtttct
caggtgttaaaccggttgacttttgcatctacactctcccacctgagacgcctgaattct
ccaatcgggagagacggcaaactggcaaagccccgacagctgcacaataccctgtgggga
atggtctgccctgctgagaccccagagggtcatgcagtaggacttgtgaagaacttagcc
ctgatggcttacatttctgtggggtctcagccatccccaattttggaattcttggaagag
tggagtatggaaaacctggaagaaatatctccagcagcaatagctgatgctaccaagatc
tttgttaatggctgctgggtaggaatacacaaagatccagagcagctcatgaatacccta
aggaagcttcgtcgtcagatggacatcattgtgtcagaggtctcgatgattagagatatt
cgtgagcgagaaatccgcatctatactgatgcaggcagaatttgtcgaccccttttaatt
gtggagaaacagaagttgctgttgaagaaaaggcatattgaccaactgaaggaacgagag
tataacaattacagttggcaggatctcgttgccagtggtgtagtggagtacattgataca
ctggaagaagagactgtgatgctggccatgactccagatgatttgcaagagaaaggtgtg
gcatactgttcaacatacacacactgtgagattcacccgtccatgatacttggagtatgt
gcatctattatcccttttcctgatcacaaccagtctcccaggaacacgtaccagtctgct
atgggtaaacaggctatgggggtttacattacaaattttcatgtccgtatggatacgctg
gcacacgtgttgtattatcctcagaagcccctggtaacaacacgctccatggagtacttg
agatttagagagctaccagcaggtatcaactcgattgttgccattgcatcatacacaggc
tataaccaggaagactctgtcatcatgaaccgttctgctgttgacagaggatttttcaga
tctgtgttctatcgctcatacaaagagcaggagtctaaaaaaggctatgatcaagaggaa
gtctttgaaaagccgacacgcgaaacatgccaaggtatgagacatgcaatctatgacaaa
cttgatgatgatggtttgatagcacctggggtacgtgtgtctggggatgatgtcatcatt
ggcaaaacagtaacactgccagaaaatgaagatgagctggaaagcactaacagacgcttc
acaaagagagactgcagcacttttctgcgaactagtgagactggtattgtagatcaggtc
atggtaacccttaaccaggaaggatacaagttctgcaagattagggtacggtccgtaaga
attccacaaattggagataaatttgctagcagacatggtcagaaaggaacctgtggtatc
cagtacaggcaagaggatatgcccttcacctgtgaaggcatcacacctgatatcattatc
aacccccatgccatcccttcccgcatgaccattggtcacttaattgagtgtcttcagggc
aaggtgtctgcaaacaagggagaaattggtgatgctacaccttttaatgatgctgtcaat
gtgcagaagatttccaaccttttatcagattatggttatcatttaagaggaaatgaggtt
ctgtacaatggcttcactggtcgaaaaatcacatcacagatcttcattggtcctacatac
taccaacgtttgaagcacatggtagatgacaaaatccattctcgtgcaagagggccaatc
cagatacttaacaggcaacccatggaagggagatctcgtgacggtggccttcgctttgga
gaaatggaacgagattgccagattgctcatggagcagcccagttcttgagagaaagattg
tttgaagcttcagacccataccaagtccatgtctgtaacctctgtggaatcatggcaatt
gcaaacacgaggactcacacctatgaatgccggggatgccgcaataaaactcagatatct
ttggttcgaatgccctacgcctgcaaacttctcttccaagaactgatgtctatgagtatt
gctcctcgtatgatgagtgtttag
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integrated database retrieval system
