Acanthisitta chloris (rifleman): 103811742
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Entry
103811742 CDS
T08456
Symbol
VPRBP
Name
(RefSeq) LOW QUALITY PROTEIN: protein VPRBP
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
achl
Acanthisitta chloris (rifleman)
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
achl01001
]
103811742 (VPRBP)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
achl04121
]
103811742 (VPRBP)
Enzymes [BR:
achl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
103811742 (VPRBP)
Protein kinases [BR:
achl01001
]
Serine/threonine kinases: Other
Other
103811742 (VPRBP)
Ubiquitin system [BR:
achl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
103811742 (VPRBP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_2nd
EIF3I
WDR55
ANAPC4_WD40
LisH
Beta-prop_WDR90_POC16_2nd
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
103811742
NCBI-ProteinID:
XP_009082983
LinkDB
All DBs
Position
Unknown
AA seq
1501 aa
AA seq
DB search
MTSGSGHVDSKAELTTLLEQWEKEHGSGQDMVPLLTRMSELIEKETEEYRKGDPDPFDDR
HPGRADPECMLGHLLRILFKNDDFMNALVNAYVMTSREPPLNTAACRLLLDIMPGLETAV
VFQEKEGIVENLFKWAREADQPLRTYATGLLGGAMENQDIAANYRDENSQLVALVLRRLR
ELQVTEMTTKQENKRPSPRKVPSDPLLPLDEEAVDMDYGEMAVDGEQEEVSGDMEISFHL
DSSHKTSSRVNSATKLDDGGLRKGKSGKQHERDGFRKAKQKLGFNTSEPERMFVELSNSS
WSEMSPWVIGTNYTLYPLTPAIEQRLILQYLTPLGEYQELLPIFMQLGSRELMMYYIDLK
RTNDVLLTFEALKHLASLLLHNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYLSYN
QDAMERVCMHPHNVLSDVVNYTLWLMECSHASGCCHATMFFSICFSFRAVLELFDRHDGL
RRLVNLISTLEILNLEDQGALLSDDEIFASRQTGKHTCMALRRYFEAHLAIKLEQVKQSL
QRTEGGVLVHPQPPYKACSYTHEQIVEMMEFLIEYGPAQLYWEPAEVFLKLSCVQLMLQL
ISIACNWKTYYARNDTVRYALDVLAILTVVPKIQLQLAEPVDVLDEAGSTVSTVGISIIL
GVAEGEFFIHDAEIQKSALQIIINCVCGPDNRISSIGKFISGTPRRKLPQAPKSSEHTLA
KMWNVVQSNNGIKVLLSLLSIKMPITDADQIRALACKALVGLSRSSTVRXXXXPLFSSCQ
IQQLMKEPVLQDKRSEHVKFCKYAAELIERVSGKPLLIGTDVSLARLQKADVVAQSRITF
PEKELLLLIRNHLISKGLGETASVLTKEADLPMTAASHSSXPLFCCGSPVTLPRTPRIAN
GISARLSTHTAVGSTATSVHAQARPSASQGPLALPGPSYASNSPLIGRISFVRERPSPCN
GRKIRVLRQKSDHGAYSQSPAIKKQLDRHLPSPPTLDSIITEYLREQHARCKNPVATCPP
FSLFTPHQCPEPKQRRQAPTNFTSRLTRRAAFPKYGGVDGGCFDRHLIFSRFRPISVFRE
ANEDESGFTCCAFSARERFLMLGTCTGQLKLYNVFSGQEEASYNCHNSAITHLEPSRDGS
LLLTSATWSQPLSALWGMKSVFDMKHSFPDDHYVEFSKHSQDRVIGTKGDIAHIYDIQTG
NKLLTLFNPDLANNYKKNCATFNPTDDLVLNDGVLWDVRSAQAIHKFDKFNMTISGVFHP
NGLEVIVNTEIWDLRTFHLLHTVPALDQCRVVFNYTGTVMYGAMLQADDEDDLLEERMRS
PFGSSFRTFNATDYKPIATIDVKRNIFDLCTDSKDCYLAVIENQGSMDAMNMDTVCRLYE
VGRQRLAEDEEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDENNENAG
EDGENDFSPSDDEEIANLLEEGDEGEDEDSDADEEVELILGDTDSSDNSDLEDDIILSLN
E
NT seq
4506 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaggatctgggcatgtggactctaaggctgagctcactactttgcttgagcaa
tgggagaaagaacatggcagtgggcaagacatggtccctcttctcaccagaatgtctgag
ctgattgagaaggagactgaggagtaccgcaaaggggacccagacccatttgatgaccga
cacccgggtcgggcggacccggagtgcatgctgggtcacctgctgaggatacttttcaag
aatgatgacttcatgaatgcgctagtgaatgcttatgtgatgacaagcagagagcctcca
ttaaacactgctgcctgtcgccttcttctggacatcatgccaggactggaaacagctgtt
gtcttccaggaaaaggaaggcatagttgaaaacctctttaagtgggcgcgagaggctgac
cagccactgaggacatatgcgactgggctgttgggaggagctatggaaaaccaggacatt
gctgctaattacagggatgagaactcacaactggtggctctggtgcttcgtcggctacga
gagttacaggtcactgaaatgactacaaaacaagagaacaagcgtcccagccctcggaaa
gtgccatcggatcctctgctgcctcttgatgaagaggctgtggatatggattatggggag
atggcagttgatggagagcaagaggaagtttctggtgatatggagatctcctttcatctt
gattcaagtcacaagaccagtagcagagtaaactctgctacaaagctagatgatggggga
ctgagaaaaggcaaatcagggaagcagcacgagagagacggattccgcaaggccaagcag
aagctgggcttcaacacctcggaaccagagcgcatgttcgtggaactgtccaatagtagc
tggtcagagatgtccccctgggtgattggcactaattatacactttaccccttgactcct
gccatagagcagaggctgattcttcaatacctgactcccttaggggagtaccaagagcta
ctccccatctttatgcaactgggatcaagggagctgatgatgtactacatcgatttgaag
cgaaccaacgatgtgctgctcacttttgaagcccttaagcatttggcatcattgctgctg
cacaacaagtttgcaacggagtttgttgctcatggaggagtgcaaaagctgctggagatt
cctcgtccttccatggcagccacaggggtgtccatgtgcttgtattacttgtcatacaat
caagatgccatggagagggtatgcatgcacccccacaatgtgctttcagatgtagtgaac
tacaccttatggctgatggagtgctcccatgcctcgggctgttgccatgctaccatgttc
ttctccatttgcttctccttccgtgctgtcttggagctctttgacaggcacgacggtctc
cgacgcctggttaacctgataagcactctggagatattaaacctggaagaccaaggagcc
ctcctgagcgatgatgagatatttgccagtcgccagactgggaaacacacctgcatggcc
ttgcgcaggtactttgaggctcaccttgccatcaaactggagcaggtgaagcagtcgctg
cagcgcaccgagggtggggttctggtccatccacagcctccctacaaggcttgctcctat
actcatgagcagattgtggagatgatggagttcctgattgagtatggcccagcacagctc
tactgggagccagcagaggtttttctcaagttgtcttgtgtccagctcatgcttcagctc
atttcaatagcctgcaactggaagacatactatgcaaggaacgacaccgtacggtatgct
ttggatgtactggccatcttgactgtggttcctaaaatccagttgcaactggcagaacct
gtggatgtgttagatgaagctggatctactgtttccactgtgggtattagtatcatcctt
ggagttgctgagggtgaatttttcatccatgatgctgagattcagaaatcagcccttcag
atcatcatcaattgtgtgtgtggcccagacaatcggatctccagtatcggcaaattcatt
tctggaactcctcggagaaagcttcctcaggcccccaaaagcagtgagcacacattagcc
aagatgtggaatgtggtgcagtccaacaatggcatcaaagtgctgctgtcgttgctgtct
ataaagatgccgatcactgatgcagaccagatccgagcgttagcctgcaaagccttggtg
gggctgtcgcgcagcagtaccgtccggnnnnnnnnnnttcccctcttcagcagctgtcag
attcagcagctgatgaaggagcctgtgctccaggacaagcgcagtgagcacgtgaagttc
tgcaagtatgctgcagagctgatagagcgtgtctcggggaagccgctgctcatcggcacg
gacgtctccctggctcggctgcagaaggcagatgtggtggcccagtcaaggatcacattt
cctgagaaggagctgctgctgctgattcggaaccatctcatctctaagggcctgggagaa
actgcatctgtcctgacaaaagaggctgacctgcccatgactgcagcatctcactcatct
ncacccctgttctgttgcggctctcctgtgactctgcctcgcactcctcgcatagctaac
ggcatctcagcccgtttgagtacccacactgctgtaggttccactgccacctctgtccac
gctcaggcaaggccatctgcatcccaaggtccacttgcccttccaggcccttcttatgcc
agcaactctcctctgattggcaggattagctttgtcagggagaggccgtctccctgcaac
ggcagaaaaatcagagtgttgcgacaaaaatcggaccatggcgcctacagccagagccca
gctatcaaaaagcagctggacagacaccttccttccccacccacgctggacagtataatc
acagagtaccttagggagcagcatgcccgctgcaagaaccctgttgccacctgtccccct
ttctctctctttactccccaccagtgtcctgagccaaaacagaggcgccaggcgccgact
aactttacctcacggctgacccgcagggcagcctttccgaagtacggaggggtggacggt
ggctgctttgatagacatcttatatttagcaggttccgtccaatttctgtgttcagggaa
gcaaacgaggatgagagtggctttacctgttgtgcattttctgcaagagaacgattccta
atgctgggtacttgcacggggcagttgaaactgtataacgtgttcagtggacaggaagag
gccagttacaactgccataactctgccatcacgcaccttgagccatccagggatggatct
ttgttgctgacatctgctacgtggagccaacctctgtctgcattgtggggaatgaagtct
gtctttgacatgaagcattccttccctgatgaccactatgtggagttcagcaaacactct
caggatagggtcattggcacaaagggggacattgcacacatctatgatattcagactggc
aacaagctattgactctgtttaacccagatcttgccaacaactataagaagaattgtgcc
acctttaaccccactgatgaccttgtcctaaatgatggtgtcctctgggatgtcagatca
gcacaagccatccacaagtttgacaaattcaacatgactatcagtggtgttttccatccc
aatgggctggaggtcatagtcaacactgaaatttgggacctccgaactttccatttgtta
cacacagtacctgcactggatcagtgtcgtgtggtcttcaactatactggcacagtgatg
tatggagctatgttgcaggcagatgatgaggatgaccttctggaggagagaatgagaagt
ccctttggctcttctttcaggacatttaatgcaactgattataaacctatagctaccatt
gatgtaaagaggaatatctttgacctgtgcacagacagcaaggactgctatctggctgtc
attgagaaccaaggcagcatggatgccatgaacatggacacggtgtgcaggctgtatgaa
gtgggcaggcagcggctggcagaagatgaagaggatgaagaagaagatcaggaggaagaa
gagcaagaggaagaagacgatgatgaagatgatgatgacacagatgaccttgatgaacta
gacacagaccagctgctggaggctgagctggaggaggatgagaacaatgagaatgctggt
gaggatggagaaaatgacttttctccctccgatgatgaggagattgccaacctcctggaa
gagggtgatgagggtgaagatgaagattctgatgctgatgaggaagtggaactgattctt
ggagataccgacagctcagataactccgacctggaggacgacataatcctgtcgctgaac
gagtga
DBGET
integrated database retrieval system
