Acanthisitta chloris (rifleman): 103811906
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Entry
103811906 CDS
T08456
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-7-like
KO
K16498
protocadherin delta 1
Organism
achl
Acanthisitta chloris (rifleman)
Pathway
achl03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
103811906
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
achl01009
]
103811906
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
achl04515
]
103811906
Protein phosphatases and associated proteins [BR:
achl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103811906
Cell adhesion molecules [BR:
achl04515
]
Cadherins
Protocadherins
103811906
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Protocadherin
Cadherin
Cadherin_CELSR2_9th
Mid2
TMEM154
LYRIC
KIAA1549
REJ
Adeno_E3_CR2
DUF6479
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
103811906
NCBI-ProteinID:
XP_009083156
LinkDB
All DBs
Position
Unknown
AA seq
681 aa
AA seq
DB search
LRFTVMARDRGQPPKTDKATVVLNIRDENDNVPTIDIRKIGRIPLRDGVASVAEDVLVDT
PIALVQVSDRDQGENGVVTCTVVGDVPFQLKPASEGEGEPQNKRKYFLHTSAPLDYEAVR
DYNVVIVAVDSGSPSLSSNNSLLVRVGDTNDNPPVFSQAVLEVSFPENNLPGERVATGVA
XEITYSLEASPLSSEAPGGIFSIDPDSGDVSVQAVLDREQRDTYEFQVTARDKGVPSLQG
STTVVVRVADRNDNEPRFMQDVFTFYVKENLQPNSPVGMVTVMDFDKGRNAELSLSIQPG
DHDQAAGIFSIENDTGTIFSTVSFDREQQTSYTFKVKAVDGGEPPRSATATVSLFVMDEN
DNAPTVTFPSNSSYTVLPPSSNMRTVVATVVATDADTGLNADLNYSIVGGNPFKLFEIDP
ASGVVSLVGKLAPKHYGLHRLVVQVNDSGQPPQSTTALLHVFVNESLSNATVVESQVARS
LHTPLAQDIAGDPSYELSKQRLSIVIGVVAGIMTVILLILVVVMARYCRSKGKHGYEAGK
KDHEDFFTPQQHDKAKKPKKDKKGKKGKQPLYSSIVTVEASKPNGQRYDSVNEKXPSPGM
GRYRSVNGGPGSPDLARHYKSSSPLPTVQLHPQSPTAGKKHQAVQDLPPANTFVGAGDNI
SIGSDHCSEYSCQASSKYSKQ
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
cttcgcttcactgtcatggcccgggaccggggtcagccccccaagacagacaaggccacg
gtggtgctgaacatccgggatgagaatgacaacgtgcccaccatcgatatccggaaaatc
gggcgcatcccgctgcgggatggggtggctagcgtggctgaggatgtgctggttgatact
cccatcgccctggtgcaggtgtcagaccgggaccaaggtgaaaatggtgtggtgacctgc
accgtggtgggtgatgtgcccttccagctcaagccagcaagtgagggtgaaggggagccc
cagaacaaacgcaaatatttcctccatacctcggcccctctggattacgaagctgtccgt
gactacaatgtggttatcgtggctgtggactcgggcagccccagcttgtccagcaacaac
tccttgctggtgcgggttggggacactaatgacaaccctcctgtgttcagccaggccgtg
ctggaggtctctttcccagagaacaacttgcctggtgagagagtggccacaggcgttgcc
nccgagatcacttactccctggaggcctcaccgctttcctcagaggcaccgggtggcatc
tttagcatcgaccctgactctggggacgtgtcagtgcaggcggtgctggaccgtgagcaa
cgcgacacctatgagttccaggtgacagccagggataagggagtgccatcactgcagggc
tccaccacagtggtggtgagggtggcggatcgcaatgacaacgagccacgcttcatgcag
gatgtgttcaccttctatgtgaaggagaacctacagcccaacagccccgtgggcatggtg
accgtgatggactttgacaagggccgcaacgccgagctcagcctctccatccagcctggt
gaccatgaccaggcggctggcatcttctccatcgagaatgacactggaaccattttctcc
actgtctctttcgaccgggagcagcagaccagctacacctttaaggtgaaggcagtggat
ggaggtgagccaccacgctctgccactgccaccgtgtccctcttcgtgatggatgagaat
gacaatgcacccacggtcaccttccccagcaacagctcctatactgtgctgccaccctcc
agcaacatgcgcactgtggtggccacagtggtcgccactgacgctgacactggtctcaat
gctgacctcaactacagcattgtcgggggcaaccctttcaaactctttgagattgaccca
gccagtggtgtggtgtcactggtgggcaagttggcccccaagcactatggcctgcaccgc
ctggttgtgcaggtgaacgacagcgggcagccaccccagtctaccactgccctgctccac
gtctttgtcaatgaaagcctgtccaatgccactgtggtggagagccaggtggcccgcagc
cttcacacccccctggcccaggacatcgctggtgaccccagctatgagctgagcaagcaa
cggcttagcatagtcattggcgtggtggctggcatcatgactgtcatcctcctcatcctg
gtggtggtcatggcccgctactgccgctccaagggcaagcacggatatgaggccggcaag
aaggaccacgaggatttcttcaccccacagcagcatgacaaggccaagaagcccaagaag
gacaagaaaggcaagaagggcaagcagcccctctacagcagcatcgtcactgtcgaggct
tccaagcccaacgggcaacgctatgacagcgtcaacgagaagnnccccagtcctgggatg
ggccgataccgctcggtcaacggtggcccgggcagccccgacctggccaggcactacaag
tccagctcgccgctgcccaccgtccagctgcacccacagtcccccactgctggcaaaaag
caccaggccgtgcaggacctgcccccggccaacaccttcgtgggcgccggcgacaacatc
tccatcggctcggaccactgctccgagtacagctgtcaggccagcagcaagtacagcaag
cag
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