Achromobacter sp. E1: V6V88_00970
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Entry
V6V88_00970 CDS
T10430
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
achm Achromobacter sp. E1
Brite
KEGG Orthology (KO) [BR:
achm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
achm03021
]
V6V88_00970 (rpoH)
Transcription machinery [BR:
achm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
V6V88_00970 (rpoH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_PafC
HTH_AsnC-type
HTH_24
Motif
Other DBs
NCBI-ProteinID:
XAZ79141
LinkDB
All DBs
Position
200591..201511
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AA seq
306 aa
AA seq
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MSLSLRHPETPAMKQPSTSLTASGNALALAIANPGALGTIDAYISAVNRLPVLSADRETE
LGRRLRDQEDLGAARELILSHLRLVVSVARQYLGYGLPHADLIQEGNVGLMKAVKRFDPE
RGVRLVSFAVHWIKAEIHEYIIRNWRLVKVATTKAQRKLFFNLRSMRPDGQTLDPEQVDH
IARELNVRHEDVSEMEVRMSGRDMSLENQDDDDDSYAPIAYLSDEGRQEPTRVLERAARD
QLQSAGLTGALDALDPRSRRIVEARWLQDDGGATLHELAQEFGVSAERIRQIEAAALKKM
RGNLAS
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttatctcttcgccatccggagacccccgctatgaaacaacccagtacctcgttg
accgcttccggcaacgctctggcgttggccattgccaatccgggcgctctcggcacgatc
gacgcctatatctctgcggtcaaccgcctgccggtgctgtccgcggatcgcgaaacggaa
ctcggccgccgcctgcgtgaccaggaagatctgggcgccgctcgcgagctgattctgtcg
cacctgcgccttgtggtgtccgtggcccggcaatacctgggttatggcctgccccacgcc
gacctcatccaggaaggcaacgtcggcctgatgaaggccgtcaagcgttttgaccccgag
cgcggcgttcgcctggtgtccttcgccgttcactggatcaaggccgaaatccacgaatac
atcatccgcaactggcggttggtcaaggtggccacgaccaaggcgcagcgcaagctgttc
ttcaacctgcgcagcatgcgtccggacggccagaccctggatccggaacaggtcgatcac
attgctcgcgagctgaacgttcgccacgaagacgtgagcgaaatggaagtccggatgtcc
ggccgcgacatgtcgctggaaaaccaggacgacgacgacgacagctacgcgccgatcgcc
tacctgtccgacgaaggccgccaagagcccacccgcgtgctggagcgcgcggcgcgcgat
cagctgcaaagcgccggcctgaccggtgcgctcgatgcgctggatccgcgctcgcgccgc
atcgtcgaagcccgctggctgcaggacgacggcggcgccacgctgcacgagctcgcgcaa
gagttcggcgtgtctgccgaacgcatccgccagatcgaagcggcggcgctgaagaagatg
cgcggcaacctcgcctcgtga
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