Achromobacter sp. E1: V6V88_01435
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Entry
V6V88_01435 CDS
T10430
Name
(GenBank) TM0106 family RecB-like putative nuclease
Organism
achm Achromobacter sp. E1
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_H_2
AAA_12
AAA_11
AAA_30
UvrD_C_2
AAA_19
Viral_helicase1
NAT10_TcmA_helicase
MeaB
IstB_IS21
NPHP3_N
nSTAND3
PDDEXK_1
ResIII
SLFN-g3_helicase
AAA_16
PIF1
Motif
Other DBs
NCBI-ProteinID:
XAZ79232
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All DBs
Position
312221..315622
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AA seq
1133 aa
AA seq
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MFSASDLGAFLECEHLTTLDLINLDDPLPQAEEDEQLELIQQKGLDHERAYLERLRASGR
RIVDVSEAGDGLAARLARTREAMADGADVIYQAAFRHDRYIGHADFLLKTARPSRLGAYS
YEASDTKLARSARAKFAIQLSFYSWLLGLEQGAAPLYMHVVLGSGREVSLRVADYAHYFR
QVMRRFEAHVDKRGDAATYPDPCEKCAQCRWDPLCKARRVQDDHLSLVANITRQQIRKLN
AQGIRTLAQLGRLAPDAAVARMEPAILHKLRAQAALQLRARTDGGRHWDRIAKDPDDAAP
RGFERMPQPDPGDMFFDMEGDPLEEGGLEYLFGLYVIDDGQERFVPFWAHNRSEEKQAFE
AFIDFVVARLHRHPEAHIYHYAPYEATAIKRLMSVHATREAEVDNLLRMNKLVDLYQVVR
EGVRVSEPGYSIKNIEHFYLPQREGGVTNAGASIVYYERWKRTGEAQLLQDIADYNRDDV
LSTYKLRDWLCALRPDGMPWANRRDAQEAIDAARFQVGEKTQAELRLEPYRAALLGPLPV
DEADWSGFDRYRALVYQLLDFHRREQKPEWWAMFARMEATEAELVEDNECLGGLVRDDSV
APEPVAQSLRYTYRFPAQQTKLRTGSACTDVRGGPAISRLTVDMGAGHPGAGVATFTVSR
KAAPPQRLSLGPGRPVSIDELANAMFRYGDALLASADGASTPFRAVDALLRHEPPRIAGV
APGTPLADPGANLLDQVVDIVGRMDETTLFLQGPPGAGKTYTGSRVLVHLLRQGKRIAVT
SNSHHAINNLLAGLEKAAREAGLAFTGAKKSGKEGDDSCFNGEFIEDVFANDKIDLSRHQ
LVAGTAWLFSRADFQQQFDYLFVDEAGQVSLANLVALGQCARNIVLLGDQMQLGQPTKGT
HPGRSGESTLEYLLNGHATIAADRGIFLDTSYRMHPAICGFISDAIYDGRLRAAESAAGQ
GLVLGADAADALAASGIRYVPVVHEGNAQSSDEEAREVAALYGSLMRQRYLDNTGRAVPI
TPDDVLVVAPYNVQVNTLRQALPEGARVGTVDKFQGQEAQVVIISMATSSGETMPRDMEF
LFSRNRLNVAVSRAKSLAILVASPALLSVRCQTPEQMALVNTLCWVAEAGQAG
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
ttgttttccgcttccgatctgggggcgtttctggaatgcgagcacctcaccacgctggat
ctgatcaatctggacgacccgttgccgcaagcagaagaggacgaacagctcgaactgatc
cagcaaaaagggttggaccacgaacgcgcgtatctggaacgcctgcgcgccagcggacgg
cggatcgtcgatgtgagcgaggcgggcgacggactggccgcgcgtctggcccgcacgcgc
gaggcgatggcggacggcgccgacgtgatctaccaagcggcgtttcgtcacgaccggtat
atcggccatgccgatttcttgctcaagaccgcgcgcccgtcgcggctgggcgcctacagc
tacgaggccagcgacaccaagctggcgcgttcggcgcgcgccaaattcgccattcagctc
tcgttctattcgtggctgctgggcctggagcagggcgcggcgccgctgtacatgcacgtg
gtgctgggcagcggccgcgaggtatccctgcgcgtggccgactacgcgcattattttcgc
caggtcatgcgccgcttcgaggcgcacgtggacaagcgcggcgatgcggccacctatccc
gacccttgcgagaaatgcgcccagtgccggtgggacccgctgtgcaaggcgcgccgcgtg
caagacgatcacctgtcgctggtcgccaacatcacgcggcagcagatccgcaagctgaac
gcccagggcatccgcacgctggcgcaactgggcaggctggcgccggacgccgccgtggcg
cgcatggagcccgccatcctgcacaagctgcgggcgcaggcggcgctgcagttgcgcgcc
cggaccgacggggggcgtcactgggaccgcatcgccaaggacccggacgatgccgcgccg
cgcggtttcgaacgcatgccgcagccggacccgggagacatgttcttcgacatggaaggc
gatccgctcgaggaaggcgggctggagtatctgtttgggctgtacgtcattgacgacggg
caggagcgcttcgttccgttctgggcgcacaaccgcagcgaagaaaagcaggcgttcgaa
gccttcatcgacttcgtggtggcgcgcctgcaccgccatcccgaggcgcacatctaccac
tacgcgccctacgaggcgacggcaatcaagcggctgatgtcggttcacgccacccgcgag
gccgaagtcgacaacctgctgcgcatgaacaagctggtggatctgtaccaggtcgtgcgc
gaaggcgtgcgcgtgtccgagccgggctattcgatcaagaacatcgaacacttctacctg
ccgcagcgcgagggcggcgtgaccaatgccggcgccagcatcgtctattacgaacgctgg
aagcgcacgggcgaggcgcaattgctgcaggacattgcggactacaaccgtgacgatgtg
ctgtccacgtacaagctgcgcgactggctgtgcgcgctgcgtcctgacggcatgccctgg
gcgaaccgccgcgacgcgcaggaagcgatcgatgccgcccggttccaggtcggcgaaaag
actcaggccgaactgcgtctggagccgtatcgcgccgcgctgctcgggccattgccggtc
gacgaagcggactggtccggcttcgaccgctaccgcgcgctggtctaccagttgctggac
tttcaccgccgcgagcagaagcccgagtggtgggcgatgttcgcccggatggaggcgacc
gaggccgagctggtggaagacaacgaatgcctgggcgggctggtgcgcgacgacagcgtg
gcccccgagcccgtggcgcaatcgctgcgctacacctaccgcttcccggcgcagcagacc
aagctgcgcaccggatcggcctgtacggacgtgcgcggcggaccggccatcagccggctg
acggtcgacatgggggccggccatccgggtgccggcgtggccaccttcaccgtgtcgcgc
aaggccgcgccgccgcagcgcctgtcgctcgggccgggcaggccggtcagcatcgacgaa
ctggccaatgccatgttccgctatggcgatgcgctgctggcgtcggccgatggcgccagc
acgccgttccgggcggtggacgcgctgctgcggcacgaaccgccgcgcatcgccggcgtg
gcgcccggcaccccgctggccgatccgggcgcgaacctgcttgaccaggtcgtggacatc
gtcggccgcatggacgagaccacgctgttcctgcaggggccgccgggggcgggcaagacc
tacaccgggtcgcgcgtgctggtgcatctgctgcgccagggcaagcgcatcgccgtcacg
tccaacagccaccatgccatcaacaacctgctcgccggcctggaaaaggcggcgcgcgag
gcgggcctggcattcacaggcgccaagaagtcgggcaaggaaggcgacgattcctgtttc
aacggcgaattcatcgaagacgtctttgccaacgacaagatcgacctgtcgcgccatcaa
ctggtggcaggcacggcgtggctctttagccgggccgattttcagcagcagttcgattac
ctgttcgtggacgaggcaggccaggtcagtctggcgaacctggtggcgctgggccaatgc
gcgcgcaacatcgtgctgctgggcgaccagatgcagctgggccagccgaccaagggcacg
catcccggccgctcgggcgaatccacgctggaatatctgctgaacggccatgccaccatc
gcggccgatcgcggcatcttcctggacacctcgtaccgcatgcacccggcgatctgcggt
ttcatttcggacgccatctacgacggccggctgcgcgccgcggaatcggcggccgggcag
ggcctggtgctgggcgcggacgctgcggacgcactggccgccagcggcatccggtacgtg
ccggtcgtgcacgagggcaatgcgcagtccagcgacgaggaagcgcgcgaagtcgccgcg
ctgtatggcagcctgatgcgccagcgctatctggacaacacgggccgcgcggtgcccatc
acgcccgacgacgtgctggtggtggcgccgtacaacgtgcaggtcaatacgttgcggcag
gcgctgcccgagggcgcgcgggtggggacggtcgacaagttccagggccaggaggcgcag
gtggtgatcatttccatggccacctccagcggcgagaccatgccgcgcgacatggaattc
ctgttcagcaggaaccggctgaatgtggcggtatcgcgggccaagtcgctggcgatcctg
gtcgccagccccgccttgctgtccgtgcgatgccagacgcccgagcagatggcgctggtc
aacacgctgtgctgggtcgccgaggccggtcaggcggggtaa
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