Achromobacter sp. E1: V6V88_01695
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Entry
V6V88_01695 CDS
T10430
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
achm Achromobacter sp. E1
Brite
KEGG Orthology (KO) [BR:
achm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
achm03000
]
V6V88_01695
Transcription factors [BR:
achm03000
]
Prokaryotic type
Helix-turn-helix
Other families
V6V88_01695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
GAF
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
HTH_30
HTH_23
Mg_chelatase
AAA_2
HTH_29
AAA_3
HTH_28
AAA
HTH_50
HTH_IclR
P22_Cro
HTH_1
HTH_3
HTH_Tnp_ISL3
TsaE
HTH_38
HTH_22
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
XAZ79283
LinkDB
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Position
369603..371519
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AA seq
638 aa
AA seq
DB search
MASYSRRQTLTQARLLFNQQGAVPGGMVAEPILRSWRRCADLGFDMRGVRRAELMTQGEL
REAQQRNEALRRMSEPAIAYLRHQAGGSGNLVILSDAQGLVLDSDGDTGFAHRASRVALM
PGAPWDEAAAGTNAIGTALVEGRPIAVHGAEHYFEPNRILTCAAVPITDSEGRTVGVLDL
SSQARDVRPDVLALVRGAVDRIEHQLFEGAYEQCTVLRLHADLAGLGQPGEALLAFQGDL
LVGANRRALHALGLAATALGVYRYADVFDGDIGRGPDAAGRVHTRTGAVYHARLRMPRTR
PPQPPAAPALRAPGAAAKTPAPSFDAATLGALARAVHLADAGVSILLQGETGVGKEVFAR
QIHARGQRAAGPFVAVNCAALPESLIESELFGYEEGAFTGARRQGSKGLLRQAHGGVLFL
DEIGDMPLLLQSRLLRVLQTREVSPLGAARPVQVDFTLVCATHRPLAHEGPDAPVRPDLY
FRIAEYTVTLEPLRTRADRLELLRDLWAAQGAGPALPPAIEAVLAAYSWPGNYRQLASVL
RTLHVLAGPAGRVDADMLPAELRGAASVAKREIPAPGAATSTPAPAGAAADLHAMTDAAI
RSALEAHGGSVSRAARALGVHRSTVYRRAAALGLARPR
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggcctcttactcccgtcggcagacgctgacgcaggcacggctgctttttaaccagcag
ggcgcggtgccgggcggcatggttgccgaaccgatcctgcgttcctggcgccgctgcgcc
gacctgggctttgacatgcgcggcgtgcgccgggccgaactcatgacgcagggcgaactg
cgcgaagcgcagcagcgaaacgaagcgctgcgccgcatgtccgaacccgccatcgcttat
ttgcgccaccaggcgggcggcagcggcaacctggtcatcctgtcggacgcgcagggcctg
gtgctggactcggacggcgacacgggctttgcgcatcgcgcctcgcgcgtggccctgatg
ccgggcgcgccctgggacgaggccgccgccggcaccaacgccatcggcaccgcgctcgtc
gaaggccgtcccattgccgtgcacggcgcggaacactatttcgaacccaatcgcatcctg
acctgcgcggccgtgcccatcacggacagcgaaggccgcaccgtgggcgtgctggatctg
tccagccaggcccgcgacgtgcgtccggatgtgctggcgctggtgcgcggggcggtggac
cgcatcgagcaccagctgttcgaaggcgcctatgaacaatgcacggtgctgcgcctgcat
gccgacctcgcggggctgggtcagcccggcgaagccctgctcgcattccagggcgacctg
ctggtcggcgccaaccgccgtgcgctgcatgcgctggggctggcggccaccgcgctgggc
gtgtaccgctacgcggacgtgttcgacggcgatatcggacgtggcccggatgccgcgggc
cgcgtgcacacgcggaccggcgcggtctatcacgcgcgcctgcgcatgccgcgcacacgc
ccgccgcaaccccccgccgccccggcgctgcgtgcgcccggcgccgccgccaaaacgccc
gcgcccagctttgacgccgccacgctaggggccctggcgcgcgccgtgcacctggcggac
gcgggcgtgtcgattctgctgcagggcgaaaccggagtgggcaaggaagtgttcgcgcgg
caaatccacgcgcgtggccaacgcgcggccggcccattcgtggcggtgaactgcgccgcg
ctgcccgagagcctgatcgaatcggaactcttcggctacgaagaaggcgccttcaccggt
gcgcgccgccagggcagcaagggcctgctgcggcaggcgcacggcggcgtgctgttcctg
gacgagatcggcgacatgccgctcctgttgcaatcgcgcctgttgcgcgtgttgcagacg
cgcgaggtttcgcctttgggcgcggcgcggcccgtgcaggtggatttcacgctggtgtgc
gcgacgcatcggccgcttgcccatgaagggccggacgccccggtgcgccccgatctgtac
tttcgcatcgccgaatacaccgtcacgctggagcccttgcgcacgcgggccgaccgcctg
gaattgctgcgcgacctgtgggcggcgcagggcgcgggtccggcgctgccgcccgccatc
gaagccgtcctcgcggcgtattcgtggccgggcaattaccgtcagctggcgtcggtactg
cgcaccctgcatgtgctggccgggccggcgggcagggtggatgccgacatgctgccagcg
gaattgcgcggtgcagcgagcgtcgcgaagcgggagatacccgcgccgggcgccgcaacg
tcaacgcccgcgccggccggtgcggccgccgacctgcacgccatgaccgatgccgccatc
cgcagcgccctcgaggcgcacggcggcagcgtcagccgcgcggcgcgcgcgctgggcgtg
caccgcagcacggtgtaccggcgcgccgccgcactggggctggcgcggccaaggtaa
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