Achromobacter sp. E1: V6V88_02645
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Entry
V6V88_02645 CDS
T10430
Name
(GenBank) ribonuclease catalytic domain-containing protein
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
achm Achromobacter sp. E1
Brite
KEGG Orthology (KO) [BR:
achm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
achm03016
]
V6V88_02645
Enzymes [BR:
achm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
V6V88_02645
Transfer RNA biogenesis [BR:
achm03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
V6V88_02645
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
RNase_P-MRP_p29
Motif
Other DBs
NCBI-ProteinID:
XAZ79462
LinkDB
All DBs
Position
complement(594021..595916)
Genome browser
AA seq
631 aa
AA seq
DB search
MYVFYEDDGSFKAGHILSETDASLQVESESGKRSKIKRANTLFNFASPDPAALMSQAAAT
AETLDLQFLWECAPQEEFDSPALAADYFGHAPTPVEQAALLMRLHGAPAYFHRRGKGRYR
PAPPDILAAALAALEKKQRQAEQQQEWVDEMAAGRLPEPIAQAAESLLIRPDKNSQQWKA
LDAACAKLGKTPDRLLLELGAWPHALALHKRRFLAVNFPRGLAFPDVELPPIDRELPLAD
AEIYSVDDVTTTEIDDALSVSTLPDGRVRVGIHVAAPGLSVTRDSELDKLARARLSTVYM
PGDKIPMQPDSVIQAFSLDAGREVPALSLYVIANSETGEVIESETRLERIVVRENLRHNM
LDTQVTEASLADPAADLPYGHWLRPLWKLAQALSAQRENVRGKPENNSRVEYSFYLDGNP
DDPDTPVRLVPRQRNAPLDRMVAEYMILANNLWGGLLNQHGVPGIYRSQQAGRVRMSTQA
LPHEAIGVPQYAWSTSPLRRYVDLVNQWQLIAAVEHGVSARLIAPFKPRDADLFAIIGAF
DAQYAAWAEFQSAMERYWCLRWLKQNGVTRTVAHVLREDLVRFANAPLVTRVGGMPEFER
GTAVEVDILGMDELSLELDCRFVGEVKGESA
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtgttttacgaagacgacggcagcttcaaggccggccatatcctgtccgagacc
gacgccagcctgcaggtggagtcggaatcgggcaagcgcagcaaaatcaagcgcgccaac
accctgttcaacttcgcctcgccggacccggcggccctgatgagccaggcggccgccacg
gccgagacgctggacctgcaattcctgtgggaatgcgcgccgcaggaagaattcgactcg
cccgccctggccgccgattacttcggccacgcccccacgcccgtcgaacaggccgcgcta
ctgatgcgcctgcacggcgcgccggcttacttccatcgccgcggcaagggccgctaccgc
cctgccccgcccgacatcctggccgccgcgctggccgcgctggaaaagaagcagcgtcag
gccgagcagcagcaggaatgggtcgacgaaatggccgccggccgtctgcccgagccgatc
gcgcaggccgccgaatcgctgctgatccgcccggacaagaactcgcagcaatggaaggcg
ctggacgccgcatgcgccaagctgggcaagaccccggaccgcctgctgctcgaactgggc
gcctggccgcacgcgctcgcgctgcacaagcgccgcttcctggccgtcaacttcccgcgc
ggactggccttccccgacgtggaactgccccccatcgaccgcgaactgccgctggccgat
gccgagatctactccgtggacgacgtcaccaccacggaaatcgacgatgcgctgtcggtc
tcgaccctgccggacggccgcgtgcgcgtcggcatccacgtcgccgcgccgggcctgtcc
gtcacccgcgacagcgaactggacaagctggcccgcgcccgcctgtccaccgtctacatg
cccggcgacaagatcccgatgcagccggacagcgtcatccaggcgttctccctggacgcc
ggccgcgaagtgcccgcgttgtcgctgtacgtcatcgccaattccgaaaccggcgaagtc
atcgaatcggaaacccgcctggaacgcatcgtcgtgcgcgaaaacctgcgccacaacatg
ctggacacccaggtcaccgaggcaagcctcgcggacccggcggccgatctgccctacgga
cactggctgcgtccgctctggaagctggcccaggccttgtcggcgcaacgtgaaaatgtg
cgcggcaagccggaaaacaactcccgggtcgaatacagcttctatctggacggcaacccc
gacgatcccgacacgcccgtacgcctggtcccgcgccagcgcaacgcgccgctggaccgc
atggtcgccgagtacatgatcctggccaacaacctgtggggcggcctgctgaaccagcac
ggcgtgcccggcatctaccgctcgcaacaagcgggccgcgtgcgcatgagcacgcaggcg
ctgccgcacgaagccatcggcgtcccgcaatacgcgtggagcacgtcgccgctgcgccgc
tatgtcgacctggtcaaccagtggcagctgatcgccgcggtggaacacggcgtatccgcc
cgcctgatcgcccccttcaagccgcgcgacgcggacctgttcgccatcatcggcgccttc
gacgcgcaatacgccgcctgggccgagttccagagcgcaatggaacgctactggtgcctg
cgctggctgaaacagaacggcgtgacgcggacggtggcgcatgtgctgcgcgaggatctc
gtgcggtttgcgaatgcgccgctggtgactcgggtgggtgggatgcctgagtttgagcgg
gggacggctgttgaagtggatattctggggatggatgagttgtctctggagttggattgt
cggtttgtgggcgaagttaaaggggaatctgcgtag
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