Achromobacter sp. E1: V6V88_03245
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Entry
V6V88_03245 CDS
T10430
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
achm Achromobacter sp. E1
Pathway
achm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
achm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
V6V88_03245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
achm03019
]
V6V88_03245
Messenger RNA biogenesis [BR:
achm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
V6V88_03245
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Motif
Other DBs
NCBI-ProteinID:
XAZ79573
LinkDB
All DBs
Position
715688..716260
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AA seq
190 aa
AA seq
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MLDREGYRPNVGIILVNTRNEVFWGKRIREHAWQFPQGGIKYGESPVQAMYRELHEEVGL
KPEHVRILGRTRDWLRYNVPDHFVRREWRGHYKGQKQIWFLLRLVGRDSDVCLRATQHPE
FDAWRWSQYWVPLDAVIEFKRDVYTQALNELSAILFRRHHETRYLRQRVHGQRAAENLPE
GTDGHAHIVG
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaccgcgaaggctaccgccccaatgtcggcatcattctcgtcaacactagaaac
gaggtcttttggggcaagcgtatcagggaacatgcatggcagttccctcagggcggcatc
aagtatggcgaaagcccggtgcaggccatgtatcgcgaactccatgaagaggtgggcctg
aagcccgagcatgtccgtattttggggcgtacacgcgattggttacgttataacgtgccc
gatcactttgtccggcgtgagtggcgcggccactataaaggacaaaaacagatttggttc
ttgttgcgcctggtgggacgtgacagtgatgtgtgcttgcgcgcgacgcagcatccggaa
ttcgacgcctggcgctggagccagtactgggttcctctggatgccgtcatcgagttcaag
cgagacgtctatacccaggcgttgaacgagttgtcggctatcctctttcggcgccatcac
gaaacccgttacctgcgccagcgtgtgcatggtcagcgggcagcagagaatttgcccgaa
ggaacggacggtcatgcgcatattgttggttga
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