KEGG   Achromobacter sp. E1: V6V88_05435
Entry
V6V88_05435       CDS       T10430                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
achm  Achromobacter sp. E1
Brite
KEGG Orthology (KO) [BR:achm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:achm02044]
    V6V88_05435 (tssC)
Secretion system [BR:achm02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   V6V88_05435 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: XAZ79978
LinkDB
Position
complement(1185595..1187067)
AA seq 490 aa
MKAQASVAPETKQSQGLLEQIMAQTRIEPTHEGYAVAERGVAAFIGEILKSDEREQQVNK
QLVDQMIAEIDRKIGHQMDAILHHKPLQELESAWRGLKLLVDRTDFRENIKIEILHVTKD
ELLDDFEGCGDITRSGLYKHVYTAEYGQFGGEPIASIVGNYTFGPSAPDIKLLSYVASVG
AMAHAPFLAAAGAEFLNLKSFQDLPNLKEVKDIFEGPRFAKWRGLRESEDARYLGLTMPR
FLLRQPYDPLENPTRSFVYRETIAGDHDNYLWGNTSYLLASRITESFAKYRWCPNIIGPQ
SGGAVDDLPVHLYESLGQLQAKIPTEVLVSDRKEFELAEEGFIPLTMRKDSDNAAFFSAN
SVQKPKRFQKTPEGQDAQTNYKLGTQLPYMFIINRLAHYIKVLQREQIGSWKERQDLERE
LNGWLKQYIADQESPSSDVRSRRPLRAAKVQVQDVAGNPGWYQVSLAVRPHFKYMGANFE
LSLVGRLDKE
NT seq 1473 nt   +upstreamnt  +downstreamnt
atgaaggctcaagccagcgttgcaccggaaacgaaacaaagccagggactgctcgagcag
atcatggcgcagacccgaatcgaacccacgcacgagggttatgccgtcgctgaacggggg
gtcgcggcattcatcggcgaaattctaaaaagcgatgaacgcgagcagcaggtaaataaa
cagctcgtcgaccagatgattgccgaaatcgatcgaaaaatcggtcatcaaatggatgca
attctgcatcacaagccgctgcaggaactcgaatccgcctggcgtggactcaaactgctg
gtggacaggacggattttcgggaaaacatcaagatcgaaatcctgcacgtcaccaaggac
gaattgctcgacgattttgaaggctgcggcgacatcacgcgcagtggtttgtataagcac
gtctataccgccgaatatgggcagttcggcggcgagccgattgccagcattgtgggcaac
tacacgtttggcccctcggcgcccgacatcaagctgcttagctatgtcgcctcggttggc
gcaatggcccacgcgccgttcctcgccgcggccggcgccgagttcctgaacctcaagagt
ttccaggatctgcccaatctgaaggaagtgaaggacattttcgaaggtccgcgctttgcg
aaatggcgcggcctgcgcgaatccgaagacgcccgctatcttggactgaccatgccgcgc
ttcttgctgcgccagccctacgatccccttgaaaaccccacccgcagcttcgtgtaccgc
gagacgatcgcaggcgaccatgacaactatctgtggggcaacacgtcctacctgctcgcc
agccgcatcaccgagagctttgccaagtatcgctggtgcccgaacatcatcggaccgcaa
tccggcggcgcggtcgacgacctgccggtgcacctgtacgaatccctgggacagctgcaa
gccaagattcccactgaagtgctggtgtccgaccgcaaggaattcgagttggccgaagag
ggtttcatccccctgacgatgcgcaaggacagcgacaacgccgccttcttctccgccaac
tcggtgcaaaagccaaaacgcttccaaaagacgcccgaaggccaggacgcacagaccaac
tacaagctgggcacgcagctgccctacatgttcatcatcaaccgcctggcgcactacatc
aaggtccttcagcgcgagcagatcggcagctggaaggagcggcaagatctggaacgtgag
ctcaatggctggctcaagcagtacatcgcggaccaggaaagcccgtcttccgatgtgcgc
agccgccgtccgctgcgcgcggccaaagtccaggtgcaggacgttgccggcaacccgggc
tggtaccaggtttcgctggccgtgcgcccgcatttcaagtacatgggcgccaacttcgag
ttgtcgctcgtcggccgcctggacaaggaataa

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