Achromobacter sp. E1: V6V88_05820
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Entry
V6V88_05820 CDS
T10430
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K18306
membrane fusion protein, multidrug efflux system
Organism
achm Achromobacter sp. E1
Pathway
achm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
achm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
V6V88_05820
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
achm02000
]
V6V88_05820
Transporters [BR:
achm02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
V6V88_05820
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_RND
YknX_C
RND-MFP_C
Beta-barrel_RND
BSH_CzcB
HH_MFP_RND
Biotin_lipoyl
BSH_CusB
CzcB_C
Beta-barrel_YknX
BSH_YhbJ
BSH_YknX
Motif
Other DBs
NCBI-ProteinID:
XAZ80052
LinkDB
All DBs
Position
1272542..1273669
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AA seq
375 aa
AA seq
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MKARSRAGAVVALAMAAALAGGAVYWKSKAAAQGGGWAMPPAKVAVAPAVQADFPVVLAG
IGSLEATRQVLVAAEVDGRVAQILFTPGEAVKAGQLLVQLNDAPEQGELARLQAQARNAR
ALLDRTRRLVPLQAATREQLDQAVADHEQAAADVRRVQALIDQKRIRAPFDGVLGVRRVN
LGQFARAGDPLVSLTDASSLYANLTLPEQALGVLRVGQPVSVTVDAHAGREFPGKVTTVE
PQVDPGTRTVRVQALLANPDGALSAGMYAQGRIGLPDRPDVITVPETAVSYSAYGDSVYV
VTPPDAAAAAPTVRQAYVKTGERLRGRVVVTEGLKAGDRVVTSGQLRLHNGAAVEILPDD
TVALAAPGYAVAQAR
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgagaagcagggcaggggcggtcgtcgccctggcaatggcggcggcgttggcc
ggcggggcggtgtactggaaatcgaaggcggccgcgcaaggcggcgggtgggcgatgccg
ccggccaaggttgcggtggcgcccgccgtgcaggcggattttccggtggtgcttgccggc
atcgggtcgttggaagccacccgccaggtgctggtggcggcggaagtcgatgggcgcgtg
gcgcagatcctgttcaccccgggcgaggcggtcaaggccgggcagttgctggtgcagttg
aacgacgcgcccgagcagggcgaactggcgcggctgcaagcccaggcgcgtaatgcgcgt
gccctgctggatcgcacgcgccggctggtgccgctgcaggccgccacgcgtgaacagctc
gaccaggccgtggccgaccatgaacaggcggccgccgacgtgcggcgcgtgcaggcgctg
atcgaccagaagcgcatcagggcgccgttcgacggggtgcttggcgtgcgccgcgtgaac
ctgggccagtttgcacgcgcgggcgatccgctggtgtcgctgacggatgcgtcctcgttg
tacgccaacctgacgctgcccgagcaggcgctgggtgtgctgcgggtgggccagccggtg
tcggtgacggtggacgcgcacgcgggccgcgagttcccgggcaaggtcaccaccgtggag
ccgcaggtcgacccgggcacccgcacggtccgcgtgcaggccctgttggccaatcccgac
ggcgcgttgtcggcggggatgtacgcgcagggccggatcggactgcccgaccgcccggat
gtcatcaccgtgccggagacggccgtcagctacagcgcctacggcgattcggtctacgtc
gtgacgccgccagacgctgctgccgcggcgccgaccgtcaggcaggcctatgtgaaaacc
ggcgagcgcctgcgcggccgggtcgtggtgaccgaggggctgaaggcgggcgaccgggtc
gtgacgtcgggccagctgcgcctgcataacggcgccgccgtcgagatcctgccggacgac
accgtggcgctggccgcgccgggatacgccgtggcgcaggcccggtaa
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