Achromobacter sp. E1: V6V88_07110
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Entry
V6V88_07110 CDS
T10430
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
achm Achromobacter sp. E1
Pathway
achm03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
achm00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
V6V88_07110 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
achm03011
]
V6V88_07110 (rpsA)
Ribosome [BR:
achm03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
V6V88_07110 (rpsA)
Bacteria
V6V88_07110 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
Cofilin_ADF
Head_fiber_dimeric
Motif
Other DBs
NCBI-ProteinID:
XAZ80301
LinkDB
All DBs
Position
1568240..1569952
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AA seq
570 aa
AA seq
DB search
MSSVSTTATGGESFADLFAQSLKSQDMKSGEVISAEVVRVDHNFVVVNAGLKSEALIPLE
EFLNDQGELEVQPGDFVSVAIDSLENGYGDTILSRDRAKRLSAWLQLEKALENGELVTGT
ITGKVKGGLTVMTNGIRAFLPGSLVDLRPVKDTTPYEGKTLEFKVIKLDRKRNNVVLSRR
QVLEASMGEERQKLLETLHEGAVVKGVVKNITDYGAFVDLGGIDGLLHITDMAWRRVRHP
SEVLQVGQEVEAKVLKFDQEKSRVSLGVKQLGEDPWVGLARRYPQGTRLFGKVTNLTDYG
AFVEVEAGIEGLVHVSEMDWTNKNVDPRKVVTLGEEVEVMVLEIDEDRRRISLGMKQCRQ
NPWEEFATNFKRGDKVRGAIKSITDFGVFVGLPGGIDGLVHLSDLSWTEAGEEAVRNFKK
GDEIEAVVLGIDTDKERISLGIKQLEGDPFNNFVATFDKGAVVPGTIKSVEAKGAVVTLS
VDVEGYLRASEISSGRVEDATTVLSAGENIEAMIVNIDRKTRSIQLSIKARDNAETADTI
QRMSDASASSGTTNLGALLKAKLDQQRNDG
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccgtttccactaccgccaccggcggcgaaagcttcgccgaccttttcgcacaa
agcctcaagagccaggacatgaagtccggcgaggtcatcagcgccgaagtcgtgcgcgtc
gaccacaatttcgtcgtcgtcaacgccggcctgaagtccgaagcgctgatccccctggaa
gagttcctgaacgaccagggcgagctcgaagtgcaacccggcgatttcgtctcggtggcc
atcgattccctggaaaacggctacggcgacaccatcctgtcgcgtgaccgcgccaagcgc
ctgtcggcctggctgcaactggaaaaggccctggagaacggcgaactggttaccggcacc
atcaccggcaaggtgaagggcggtctgaccgtcatgaccaacggcatccgcgcgttcctg
ccgggttcgctggtggatctgcgtccggtcaaggacaccaccccgtacgaaggcaagacc
ctcgaattcaaggtcatcaagctcgaccgcaagcgcaacaacgttgtgctgtcgcgtcgc
caggtgctggaagccagcatgggcgaagagcgtcaaaagctgctcgaaaccctgcacgaa
ggtgccgtggtcaagggcgtggtcaagaacatcaccgactacggcgcgttcgtcgacctg
ggcggcatcgatggcctgctgcacatcaccgacatggcctggcgccgtgtgcgtcacccc
tccgaagtcctgcaagtgggtcaggaagtcgaagccaaggtcctcaagttcgaccaggaa
aagagccgcgtctccctgggcgtcaagcagcttggcgaagatccgtgggtgggcctggct
cgccgctacccgcaaggcacccgcctgttcggcaaggtcacgaacctgaccgactacggc
gcgttcgttgaagtcgaagccggcatcgaaggcctggtccacgtgtccgaaatggactgg
accaacaagaacgtcgacccgcgcaaggttgtgaccctgggcgaagaagtcgaagtcatg
gtcctggaaatcgacgaagaccgtcgccgcatttcgctgggcatgaagcagtgccgccag
aacccgtgggaagagttcgccacgaacttcaagcgtggcgacaaggtccgcggcgccatc
aagtcgatcaccgacttcggcgtgttcgttggcctgcccggcggcatcgacggcctggtc
cacctgtccgacctgtcgtggacggaagctggcgaagaagccgtccgcaacttcaagaag
ggcgacgaaatcgaagccgtggttctgggcatcgacaccgacaaggaacgcatctcgctg
ggcatcaagcagctggaaggcgaccccttcaacaacttcgtcgccacgtttgacaagggc
gccgtggttccgggcaccatcaagtcggtcgaagccaagggcgccgtggttacgctgtcc
gtggacgtcgaaggctacctgcgcgcttccgagatctcctcgggccgcgtcgaagatgcc
accaccgtgctgtccgccggcgagaacatcgaagccatgatcgtcaacatcgaccgcaaa
acgcgttcgatccagctgtcgatcaaggcccgcgacaacgccgaaaccgccgacacgatc
cagcgcatgtccgacgccagcgcttcgtccggcaccaccaacctcggcgcgctgctgaag
gccaagctggaccaacagcgcaacgacggttaa
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