Achromobacter sp. E1: V6V88_07115
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Entry
V6V88_07115 CDS
T10430
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
achm Achromobacter sp. E1
Brite
KEGG Orthology (KO) [BR:
achm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
achm03032
]
V6V88_07115
03036 Chromosome and associated proteins [BR:
achm03036
]
V6V88_07115
03400 DNA repair and recombination proteins [BR:
achm03400
]
V6V88_07115
DNA replication proteins [BR:
achm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
V6V88_07115
Chromosome and associated proteins [BR:
achm03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
V6V88_07115
DNA repair and recombination proteins [BR:
achm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
V6V88_07115
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
TetR_C_30
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
XAZ80302
LinkDB
All DBs
Position
1569956..1570318
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AA seq
120 aa
AA seq
DB search
MTKSELIAALAARYPQLAARDTDYAVKTVLDAMTQALASGQRIEIRGFGSFSLSQRSPRI
GRNPKSGEQVLVPGKQVPHFKAGKELRERVDLVGGNDEDAQSSGSSESMPSSMAGLHAMH
NT seq
363 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaagtcggagctgatcgccgccttggcggcccgctatcctcagctggccgcccgc
gacaccgattacgcggtcaagaccgtacttgatgcaatgacccaggcgcttgcctcgggt
cagcgcatcgagatccgcggttttggcagtttttcgttgtcgcagcggtctccccgcatc
ggtcgcaatcccaaatccggcgagcaggtgctggtgcctggcaaacaggtgccgcacttc
aaggcaggcaaggaattgcgcgaacgggtggacctggtcggcggcaatgacgaggacgct
caatcctccggatcgagcgagtcgatgccgtcttccatggcaggtttgcacgccatgcat
tga
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