Achromobacter sp. E1: V6V88_18185
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Entry
V6V88_18185 CDS
T10430
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
achm Achromobacter sp. E1
Pathway
achm03420
Nucleotide excision repair
achm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
achm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
V6V88_18185
03430 Mismatch repair
V6V88_18185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
achm03400
]
V6V88_18185
Enzymes [BR:
achm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
V6V88_18185
DNA repair and recombination proteins [BR:
achm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
V6V88_18185
MMR (mismatch excision repair)
Other MMR factors
V6V88_18185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
XAZ77196
LinkDB
All DBs
Position
complement(3917150..3919279)
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AA seq
709 aa
AA seq
DB search
MPDQDPLSHTPDNDNAAARAAERPDPLADLNPAQREAAEFGVAGAPGNDGPLLVIAGAGS
GKTNTLAHRVAHLILNGADPQRMLLLTFSRRAALEMERRVGSVLQRVMNLRSSQQAPSLP
WAGTFHAIGARLLRDCAQRIGLSEAFTIHDRGDAEDLMGMVRHELGLSSTKSRFPLKGTC
LAIYSRVVNSQTPVGDVLKTSFPWCAQWEDELKNLFRAYVAAKQDQQVLDYDDLLLYWSE
MMSDEEIAADVGARFDHVLVDEYQDTNRLQSAILLAMKPDGRGLTVVGDDAQSIYSFRAA
TVRNILDFPNLFPAPARVITLDRNYRSSQPILNASNAVIAQATERYAKDLWTDRKSSQMP
ELVTVSDEAGQARWVADQVLAQREGGATLKSQAALFRTASHSAALELELTRRNIPFVKFG
GLRFLEAAHVKDLLSILRWAENPRGRMAGFRVAQLMPGIGPATAGKLMDAMSASAEPLRT
LREFKPGAAAQEEWGAFADTYAALCDPTLKWPADVDLALRWYNGQLERLYDDARVRKTDL
DQLVRIASGYPSRERFLTELTLDPPDATSDESGAPLRDEDYMILSTIHSAKGQEWKAVYV
LNVVDGCIPSDMSTGTAEEIEEERRLLYVAMTRAKERLQLVVPQRFYVHQQTGMGDRHVY
GSRTRFITNAMLPLFDHLPKLPDLPPGRAEPREPQAPRIDVAKRVRSLF
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgccagaccaagatcctctttcgcatactcccgacaacgacaacgccgccgcgcgagcg
gccgagcggcccgatccgttggccgacctgaatcccgcccagcgcgaagcggccgaattc
ggcgtggcaggcgcgcccggcaacgatggcccgctgctggtcatcgcgggggcggggtcg
ggcaagaccaacacgcttgcgcatcgcgtggcccacctgatcctgaacggggcggacccg
cagcgcatgctgctgctgacgttttcgcgtcgcgcggcgctggaaatggagcggcgcgtg
ggatcggtgctgcagcgggtgatgaacttgcgctcgtcgcagcaggcgccgtcgctgccg
tgggcgggcaccttccatgcgatcggcgcgcggctcttgcgcgactgcgcccagcgcatc
ggtctgtccgaggccttcaccatccacgaccgcggcgatgccgaggacctgatgggcatg
gtgcgccatgaacttggcctgtcctccaccaaatcgcgctttccgctcaaagggacatgc
ctggcgatctattcgcgcgtggtcaacagccagacgcccgtgggcgacgtgctcaagacc
tcgtttccgtggtgcgcccaatgggaggacgagctcaagaacctgttccgcgcctacgtc
gcggccaagcaggaccagcaggtgctggactacgacgatctgctgctgtactggtccgag
atgatgtcggacgaggaaatcgcggccgacgtgggcgcgcgcttcgaccacgtgctggtt
gacgaataccaggacacgaaccggctgcaatcggccattcttctggccatgaagccggac
ggccggggcttgacggtcgttggagacgacgcacagtccatctattcgttccgcgcggcc
acggtgcgcaacatcctggactttcccaatctctttcccgcgccggcgcgcgtcatcacg
ctggaccgcaactaccggtcctcgcaacccatcctgaatgcctcgaacgcggtgatcgcg
caggccaccgaacgctacgccaaggacctctggaccgatcgcaagtcctcgcagatgccc
gagctggtgacggtcagcgacgaagccggccaggcgcgctgggtggccgaccaggtgctt
gcgcagcgcgagggcggcgcgacgctcaagtcgcaggcggcgctgtttcgcacggccagc
cacagcgccgcgctggaactggagctgacccgtcgcaacatcccgttcgtcaaatttggc
gggctgcgctttctggaagcggcacacgtgaaggatctgctgtcgatcctgcgctgggcc
gagaatccgcgcggacgcatggcgggtttccgggttgcgcagctgatgccgggcatcggg
ccggccacggcgggcaagctgatggacgccatgtccgcctcggccgagccgctgcgcacg
ctgcgcgaattcaagcccggcgcggcggcccaggaagagtggggcgcttttgccgacacc
tacgccgcgttgtgcgaccccaccctgaagtggcccgccgacgtggacctggcgctgcgc
tggtacaacggccagctcgagcgcctgtatgacgatgcgcgcgtgcgcaagaccgacctg
gaccagctggtgcgcatcgcgtcgggctacccgtcgcgcgagcgcttcctgaccgagctg
acgctggatccgcccgacgcgaccagtgacgaatccggcgcgccgctgcgcgacgaggac
tacatgatcctgtccaccatccattcggccaagggccaggaatggaaggcggtgtatgtg
ctgaacgtcgtggatggctgcattccgtcggacatgagcacgggcaccgccgaagagatc
gaggaagagcgccggctgctttacgtggccatgacgcgggccaaggaacggcttcagctc
gtcgtgccgcagcgtttttacgtgcaccagcagacgggcatgggcgaccggcacgtttat
ggctcgcgcacgcggttcatcaccaacgcgatgctgccgctctttgaccacctgcccaag
ctgcccgacctgccgcccggacgggccgagccgcgcgagccgcaggccccgcgcatcgac
gtggccaagcgggtgcgcagccttttctga
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