Achromobacter sp. E1: V6V88_19575
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Entry
V6V88_19575 CDS
T10430
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
achm Achromobacter sp. E1
Pathway
achm02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
achm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
V6V88_19575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
achm03021
]
V6V88_19575
Transcription machinery [BR:
achm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
V6V88_19575
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
HTH_23
Sigma70_r4
HTH_11
HTH_29
HTH_28
HTH_Tnp_ISL3
HTH_AsnC-type
HTH_38
GerE
HTH_24
PhyR_sigma-like
NirdL-like_HTH
HTH_10
DUF6052
HTH_22
Motif
Other DBs
NCBI-ProteinID:
XAZ81699
LinkDB
All DBs
Position
complement(4219177..4219680)
Genome browser
AA seq
167 aa
AA seq
DB search
MHTLYSDNHGWLLGWLRRRVGDPFDAADLMQDTFVRVLKTHTGRCGAANAQPAADIREPR
AYLATIAKSLMIDFFRRQTLERTYLEVLAALPPQEVPSLETQAVLRSALIEIDAMLDGLG
LKVKQAFLMAQCEDLPYAEIARRLGVSRRSVDNYLARAMAHCCLLLP
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atacatacgctttacagcgacaatcatgggtggctgctggggtggttgcgccgtcgtgtg
ggcgatcctttcgacgcggctgatttaatgcaggacaccttcgtcagggtgttgaagacg
catacagggcgatgcggcgcggccaacgcccagcccgccgctgacattcgggaaccgcgc
gcctatctggcgaccatcgccaaaagcctgatgatcgatttcttccggcgccaaacgctg
gagcggacctatctcgaggttttggccgcactcccaccgcaggaggtgccttcgctcgaa
acgcaggccgtgttgcgtagcgccttgatcgagatcgacgccatgctcgacggactcgga
ttgaaggtcaagcaggccttcttgatggcgcagtgcgaagacctgccctatgccgagatt
gcccgccgtctaggggtatcgcgtcgcagcgtggacaattatctggcgcgcgccatggcg
cattgctgcctgctcttgccgtga
DBGET
integrated database retrieval system
