Achromobacter sp. E1: V6V88_20620
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Entry
V6V88_20620 CDS
T10430
Name
(GenBank) UvrD-helicase domain-containing protein
Organism
achm Achromobacter sp. E1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_22
AAA_30
DEAD
TniQ
Motif
Other DBs
NCBI-ProteinID:
XAZ77645
LinkDB
All DBs
Position
complement(4438007..4441462)
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AA seq
1151 aa
AA seq
DB search
MAEPDRLPHDHAARAAALDPARSFLVQAPAGSGKTELLTDRILALLATVNRPEEIVAITF
TRKAASEMHARVLSKLRRGLDAPPEAAHERRSWDLARAALARNAEQGWHLLDHPARLAIR
TIDSFCAGLVRSMPWLSELGGMPDITDDARSHYEAAARATLDLADDYEAVRILLRHLDVD
VQAAKDAIADMLGQRDQWLPLLRHGSDREAMEAMLAEAIGEDLDALCAAMPYGWSESLCG
PARLAAAHLQDAEDDNKLAALLDWTEALQPDAELLDAWRAVAHLLLTSTGSLRKTVNKNL
GFPAKCAHKEPFVAWLEGADAQAAWVRRLHAVRDIPAPHFTDAQWEVLGAQLMTLALAVA
QLRLRFAEKGEVDFIEIAQRAAAALGSADDPGELLLKLDASIRHLLIDEFQDTSQTQLDL
LRTLTAGWQSGDGRSLFLVGDPMQSIYRFRKAEVGLFLEVADIGVGEVKPDFLNLTDNFR
SQAGIVDWVNQSFVDLLPRRSDAAAGAIAYSPSTAFHPALPDPAVRFHPAWSREGAPPAE
EQAEDIAVGLVRQALIDHKGAKHPVAILVRARSHLGNLTRRLAQEGIRSRAVDLVPLALR
PVVADLVQLVRAVSHPADRLAWLSVLRAPYCGLTLTSLQRLFGDDHITPVPVLLERALRI
APQPIATAAPEASGPQGSLFDAPAPEPQAPSAQAILSPDEFARLRQVASVLLDKRNASGA
IPFAAWVESLWRRLGGPGLYAGLSVANDAESLFQLVERLAPHGNIDVAALDAGISRLFAA
PDALDEDEGAVEIMTMHKSKGLQFETVILYGLHRAPRGDQAPLVRFEQSGGRVLFGPVKP
RAETEADPVSRYLGAREARRASYEIDRLLYVAATRARKRLHLVGHVSIDEASGQIKTPPA
ASLLGRLWPCLTPPVPPSLNGETVQEETDAPEWQGEPLRRIDNAGLAQLQRQSSITMSAG
FATATRGAWGEAAEHPAWQLEASYDAAIGTLAHAWLARIGQDGIQAWPPEALTPRLPAMR
RQLTRAGIPASQADAAAEAVLETLQATLADERGLWLLSQSGARREWPLIDAAGKVSVIDL
ALSTEDGWLIVDYKTGRPHPGESPAAFAIRMRQRHGEQLQRYCTQVTALDGRSARAALYF
PRAKAWIDLLE
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacccgatcgccttccgcatgaccacgccgctcgcgcggcggcgctcgatccc
gcgcggtccttcctcgtccaggcgcccgcaggctcaggcaagaccgaactcctcaccgac
cgcatcctggccttgctggccacggtgaaccggcccgaagaaatcgtcgccatcacgttc
acgcgcaaggccgcgtccgagatgcacgcccgcgtgctgagcaagctgcggcgcgggctg
gatgcgcctcccgaggccgcgcacgaacgccgcagctgggacctcgcccgcgcggcgctg
gcgcgcaatgccgaacagggctggcatctgctggatcatcccgcgcgtctcgccatccgc
accatcgactcgttctgcgcggggctggtgcgcagcatgccgtggctgtcggagctgggc
ggcatgccggacatcacggacgatgcgcgctcgcactacgaagccgccgcgcgcgccacg
cttgatctcgcggacgactacgaggccgtccgcattttgctgcgccacctggacgtcgac
gtgcaggccgccaaggacgccatcgccgacatgctgggccagcgcgatcaatggcttccg
ctgcttcgccacggctccgaccgcgaggccatggaggccatgctggccgaggccatcggc
gaagacctcgatgccttgtgcgccgccatgccctacggctggtccgaatcgctttgcggc
ccggcgcgcctggcggccgcccacctgcaggacgccgaagacgacaacaagctggctgcg
ttgctggactggaccgaagcactgcaacccgacgccgaactgctggacgcctggcgcgcc
gtcgcgcacctgctgctgaccagcaccggctccctgcgcaagaccgtcaacaagaacctg
gggttcccggccaagtgcgcgcacaaagaacccttcgtcgcctggctggaaggcgccgac
gcgcaagccgcctgggtgcgccgcttgcacgccgtgcgcgatattccggcgccgcatttc
accgatgcccaatgggaagtgctgggcgcgcagctcatgacgcttgccctggccgtggcg
cagttgcggctgcgctttgccgaaaaaggcgaggtcgactttatcgagatcgcccagcgg
gccgcggccgcgctgggtagcgccgacgacccgggcgaactgctgctcaaactcgacgcc
tcgatccggcatctgcttatcgacgaattccaggacaccagccagacacagctcgacttg
ctgcgtaccctcacggcaggctggcagtccggcgatggccgcagcctgttcctcgtgggc
gatcccatgcagtcgatctaccgcttccgcaaggcagaggtcggcctgtttctcgaagtc
gccgacatcggcgtgggcgaggtcaagcccgacttcctgaacctcacggacaacttccgt
tcgcaggcaggcatcgtcgactgggtgaaccagtcgttcgtcgacctgctgccccggcgt
agcgacgctgccgcgggcgccatcgcgtacagcccgtccacggcctttcatccggcgctg
cccgaccccgcggtgcgctttcatccggcgtggtcgcgcgagggcgcgccgcccgccgaa
gaacaggctgaagacatcgccgtgggactggtgcgccaggcgctgatcgaccacaagggc
gccaagcaccccgtcgcgattctcgtgcgcgcccgcagtcacctgggcaacctcacgcgc
cggctcgcacaggaaggcatacgctcgcgcgccgtcgacctggtgccgctggcgctgcgg
ccggtggtggccgacctggtgcaactcgtgcgcgccgtgtcgcatccggccgaccgcctc
gcttggctgtccgtgctgcgcgcgccctattgcggcttgacgctcacctcgttgcagcgg
ctctttggcgacgaccacatcacgccggtgcccgtgctgctggaacgcgccttgcgcatc
gccccgcagcccattgcaacggcagcgcccgaggcatccggcccgcaaggctcgctcttt
gacgcacccgccccagaaccgcaagccccgtccgcgcaagcaatactcagccccgacgaa
ttcgcgcgcctgcgccaagtcgcgtcggtcctcctggacaaacgcaacgcatcgggcgcc
atccccttcgccgcgtgggtggaatcgctgtggcgccgcctgggcggccccggcttgtac
gccggcctgtctgtcgccaacgacgccgaaagcctgttccaactggtcgaacgccttgcc
ccgcacggcaacatcgacgtggccgccctggacgccggcatctcccgcctcttcgccgcg
cccgacgcgttggacgaagacgaaggcgcggtcgagatcatgaccatgcacaagtccaag
ggcctgcagttcgaaaccgtgatcctgtacggcctgcaccgcgcgccgcgcggcgatcag
gctcccctggtgcgcttcgaacaaagcggcggccgcgtcctcttcggcccggtcaagcca
cgcgccgaaacagaagcagacccggtctcacgctacctgggcgcccgcgaggcccgccgc
gcctcctacgaaatagaccgtctcctctacgtcgccgccacccgcgcccgcaaacgtctg
catctggtcggacacgtctcgatcgacgaagcctctggccaaatcaagaccccgcccgca
gccagcctgctgggccgcctgtggccgtgcctgaccccgcccgttccaccttcgctgaat
ggcgaaacggtgcaagaagaaaccgacgcccccgaatggcaaggcgaacccctgcgacgc
atcgacaacgccggcctcgcgcagctgcaacgccaatccagcatcaccatgagcgccggc
ttcgccacggccacccgaggcgcctggggcgaagccgccgaacatcccgcctggcaactc
gaagccagctacgacgccgccatcggcaccttggcccacgcctggctggcccgcatcggc
caggacggcatacaagcctggccccccgaagccctcacgccgcgcctacccgccatgcgc
cgccaactcacccgagccggcatccccgccagccaggcagacgccgccgccgaggccgtc
ctggaaacgctgcaagccaccctggcagacgaacgcggcctctggctcctatcccaatcc
ggcgcccgccgcgaatggcccctcatcgacgcggccggaaaagtctcggtcatcgacctg
gcgctcagcaccgaagacggctggctgatcgtcgactacaaaaccggccgcccccacccg
ggagaatcccccgccgccttcgcaatccgcatgcgccaacgccacggcgaacaattgcag
cgctactgcacccaagtcaccgccctggacggccgcagcgcccgagccgcgttgtacttc
ccgcgcgcaaaggcgtggatagatctgctggagtaa
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