Achromobacter sp. E1: V6V88_21925
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Entry
V6V88_21925 CDS
T10430
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
achm Achromobacter sp. E1
Pathway
achm02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
achm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
V6V88_21925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
achm03021
]
V6V88_21925
Transcription machinery [BR:
achm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
V6V88_21925
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
GerE
HTH_SB
TnsD
HTH_28
HTH_38
HTH_24
HTH_20
HTH_7
HTH_40
HTH_11
Motif
Other DBs
NCBI-ProteinID:
XAZ77882
LinkDB
All DBs
Position
complement(4706920..4707441)
Genome browser
AA seq
173 aa
AA seq
DB search
MPAPLIPSADNVTKLYREHHGWLSAWLRKKLGSSFDAADLAHDTFVRLMAGRRREDTGAE
PRALLAHIAKGLVADHWRRRSVEDAYLAAVAQVPPAEAPSPEARALILETLHAIDAALHA
LPSRTREVFLLSQFDGMGYDEIARQLRVSLSTVKRHMQAAFAACLIAYQADAA
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
ttgcctgcgccgctaattccatccgccgacaacgtcacgaagctctatcgcgaacaccac
ggctggctctcggcatggctgcgcaagaagctgggcagttccttcgatgccgcggacctg
gcgcacgacacgttcgtgcggctgatggccggccggcgccgggaagacaccggcgccgag
ccgcgcgcgctgctggcccacatcgccaagggcctggtggcggaccactggcgccgccgg
tcggtcgaagacgcctacctggccgcggtggcgcaagtgccgcccgccgaagccccctcg
ccggaggcgcgcgcactgatcctggaaacgttgcacgccatcgacgccgccctgcatgcg
ctaccgtcccgcactcgcgaggtcttcctgctgtcgcagttcgacggcatgggctatgac
gagatcgcccggcagcttcgcgtgtcgctctcgaccgtaaagcgccatatgcaggctgct
tttgccgcctgcctgatcgcctaccaggcggatgcggcatga
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