Achromobacter sp. E1: V6V88_25790
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Entry
V6V88_25790 CDS
T10430
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
achm Achromobacter sp. E1
Brite
KEGG Orthology (KO) [BR:
achm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
achm03009
]
V6V88_25790 (rimO)
Enzymes [BR:
achm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
V6V88_25790 (rimO)
Ribosome biogenesis [BR:
achm03009
]
Prokaryotic type
ribosomal protein modification factors
V6V88_25790 (rimO)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
DUF5005
CLP1_P
RNase_II_C_S1
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
XAZ81756
LinkDB
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Position
5595633..5596979
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AA seq
448 aa
AA seq
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MTAAAQEANPGRAPRVGFVSLGCPKALVDSERILTQLRTEGYEITPEYNGADVVVVNTCG
FIDSAKAESLEAIGEALAENGKVIVTGCMGVEESVIRDVHPSVLSVTGPQQYEEVVRAVH
GVAPPRTDHNPYVDLVPPQGVKLTPRHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPVGD
VLNEAERLVKAGVKELLVISQDTSAYGVDLKYRSGFWNGRPVKTRMTELCMALSEMGVWT
RLHYVYPYPHVDEVIPLMAEGKILPYLDIPFQHASPRILKLMKRPAFEDKTLARIKRWRE
ICPDLTIRSTFIVGFPGETEEDFQYLLDWMQEAQLDRVGCFQYSPVEGAPANLLDDPVPD
DVKQDRWERFMALQQTISAQRLALKVGREIDVLIDEVDEDGAVGRSAGDAPEIDGCVYVS
SDKPLQPGDMVRVRVTESDEYDLWADAL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atcacggccgccgcccaagaggccaacccggggcgcgcgccgcgcgtggggttcgtgtcg
ctgggctgccccaaagccctggtcgactccgaacgcatcctgacccagctgcgcaccgaa
ggctacgaaatcacgccggaatacaacggtgccgacgtggtcgtcgtgaacacctgtggt
ttcatcgacagcgccaaggccgagtcgctggaagccatcggcgaagcccttgccgagaac
ggtaaggtcatcgtgaccggctgtatgggcgtcgaggaatcggtgatccgcgacgtgcat
cccagcgtgctgtcggtgaccggtccccagcaatatgaagaggtcgtgcgcgccgtgcac
ggcgtggcgcccccgcgcacggaccacaatccctacgtggacctggtgccgccgcagggc
gtgaagctcacgccgcgccactacgcgtacttgaagatctccgaaggctgcaatcatcgc
tgcagcttctgcatcattccctcgatgcgcggcgacctggtcagccgtcccgtcggcgac
gtgctcaatgaagccgagcgcctggtgaaggccggcgtgaaagagctgctcgtgatctcg
caggacaccagcgcctacggcgtggacctgaaataccgcagcggtttctggaacggccgc
ccggtcaagacccgcatgaccgagctctgtatggccttgtccgaaatgggcgtctggacg
cgcctgcattacgtgtacccgtacccgcacgtcgacgaagtgattccgctgatggccgag
ggcaagatcctgccctacctggacatcccgttccagcacgccagtccgcgcatcctgaag
ctgatgaagcgcccggccttcgaagacaagacgcttgcgcgcatcaagcgctggcgcgaa
atctgcccggacctgacgatccgctcgaccttcatcgtcggctttcccggcgaaaccgag
gaagacttccaatatctgctggactggatgcaggaagcgcagctggaccgcgtgggctgt
ttccagtattcgccggttgaaggcgcgccggccaacctgctggacgatccggtgccggac
gacgtcaagcaggatcgctgggagcgcttcatggcgctgcagcagaccatctccgcccag
cgcctggcgctgaaggtcggccgcgagatcgacgtgctgatcgatgaggtcgacgaagac
ggcgcggtgggccgcagcgcgggcgacgcgccggaaatcgacggctgcgtctacgtcagt
tcggacaagcccctgcagccgggcgacatggtgcgcgtgcgcgtcaccgagtccgacgag
tacgacctctgggccgacgcgctgtaa
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