Actinomyces sp. HMT 175: JJJ14_01660
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Entry
JJJ14_01660 CDS
T10480
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
achn Actinomyces sp. HMT 175
Pathway
achn03030
DNA replication
achn03430
Mismatch repair
achn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
achn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JJJ14_01660
03430 Mismatch repair
JJJ14_01660
03440 Homologous recombination
JJJ14_01660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
achn03032
]
JJJ14_01660
03400 DNA repair and recombination proteins [BR:
achn03400
]
JJJ14_01660
Enzymes [BR:
achn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JJJ14_01660
DNA replication proteins [BR:
achn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JJJ14_01660
DNA repair and recombination proteins [BR:
achn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JJJ14_01660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
QQQ59567
LinkDB
All DBs
Position
complement(390196..391038)
Genome browser
AA seq
280 aa
AA seq
DB search
MPFYHRPPADRGPLRPRSPMAPGQAAATPTPAELVEATGVGYAVVDLETTGLSPTTDSIL
EVALVLTDAAGRVERSWSTLIDPGAGVDVGPTHIHGLVAEELIGAPGFDEVADLLAADLA
GRAVVAHNARFDVGFLTQALGTRGLLDRGARVPRVCTMEWARHFMTTPSRRLTTCCEVAG
VEIGRHHNALDDALAAAGLLRHYLAVGAQRGEEPVAWARSLVEARRFTGWHWDAARARAG
VERLTERTTPGAERARPEPESSGPARSGSGPPGRVSPLRS
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgcccttctaccaccgcccacccgccgaccgcggcccgctgcgcccccgctcccccatg
gcccccggccaggcggccgccactcccacacccgcagaactggtcgaggcaaccggggtc
ggctacgccgtcgtcgacctggagaccaccggcctgtcccccacgacggactcgatcctg
gaggtcgcgctcgtactgaccgacgccgccgggcgcgtcgagcgcagctggtccacgctc
atcgaccccggcgcgggtgtggacgtgggccccacccacatccacggtcttgtcgccgag
gagctcatcggggcgcccggcttcgatgaggtcgccgacctgctggcggccgacctggcc
gggcgggcagtggtggcccacaatgcccgcttcgacgtcggattcctcacccaggcgctg
gggacgcgagggctgctcgaccgcggcgcgcgggtgccgcgggtgtgcacgatggagtgg
gcgcgccacttcatgacgacgccgtcgcgccggctgaccacctgctgcgaggtggccggg
gtggagatcggccgccaccacaacgcgctcgacgacgccctggccgccgccggcctgctg
cgccactacctggcggtgggggcacagcggggcgaggagccggtggcgtgggcccgctcg
ctcgtggaggctcgccgcttcaccggctggcactgggacgcggccagggctcgggccggc
gtcgaacgtctcacggagcgcaccacgcccggtgctgagcgagcccgtccggagcccgag
tcctcggggccggcccgctcgggatcagggccaccgggccgggtgtcgccgctccgttcc
tga
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