Actinomyces sp. HMT 175: JJJ14_04350
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Entry
JJJ14_04350 CDS
T10480
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
achn Actinomyces sp. HMT 175
Brite
KEGG Orthology (KO) [BR:
achn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
achn03032
]
JJJ14_04350
03036 Chromosome and associated proteins [BR:
achn03036
]
JJJ14_04350
03400 DNA repair and recombination proteins [BR:
achn03400
]
JJJ14_04350
DNA replication proteins [BR:
achn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
JJJ14_04350
Chromosome and associated proteins [BR:
achn03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
JJJ14_04350
DNA repair and recombination proteins [BR:
achn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
JJJ14_04350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DSBA
HU-DNA_bdg
DUF7342
DUF2267
Motif
Other DBs
NCBI-ProteinID:
QQQ60042
LinkDB
All DBs
Position
1017602..1017883
Genome browser
AA seq
93 aa
AA seq
DB search
MSVNRTELIAAIAEKAGLTKTDADAFLGAFQDVLVENVAKGEAVKITGLMGIERVERAAR
TGRNPRTGEEIQIPAGYGVKVTVGSSLKKAVAE
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcaaccgcaccgagctcatcgccgccatcgccgagaaggccggcctgaccaag
accgacgccgacgccttcctgggagccttccaggatgtcctcgttgagaacgtcgccaag
ggtgaggccgtgaagatcaccggcctcatgggtatcgagcgcgtcgagcgtgccgcacgc
actggccgcaacccccgcaccggtgaggagattcagatccccgccggctacggtgtcaag
gtcaccgtcggctcctcgctgaagaaggctgtcgccgagtga
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