Actinomyces sp. HMT 175: JJJ14_04890
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Entry
JJJ14_04890 CDS
T10480
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
achn Actinomyces sp. HMT 175
Pathway
achn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
achn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JJJ14_04890 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
achn03400
]
JJJ14_04890 (mutM)
Enzymes [BR:
achn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
JJJ14_04890 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
JJJ14_04890 (mutM)
DNA repair and recombination proteins [BR:
achn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JJJ14_04890 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
RNHCP
Zn_Tnp_IS91
Motif
Other DBs
NCBI-ProteinID:
QQQ60131
LinkDB
All DBs
Position
1134659..1135726
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AA seq
355 aa
AA seq
DB search
MPELPEVEVVRAGLARHVAGRTVTRVEVFDPRPLRRQDGGAQAFVDQLTGRTLTAAVRRG
KFLWLPLDDGRALSAHLGMSGQLLVRGTTVATAPDAAPESHRAAAFLADPDTLPGGRPAD
LSATEQPRYVRDISTSARHLRVRLHLSTGLGGDNCDNGAGAAVLDLVDQRMLGGLHVVDL
IPTADGAPGGMGDPRPLLPADATHIARDLLDPALQLAGPTGVVARVRASRRAIKTQLLDQ
GLVSGIGNIYADEGLWEAGVHGLRPGTGLGPRVVARILESTAEVMRRALEVGGTSFDALY
VDVEGAAGFFARELGAYGRHGLECRRCGATMARETLGGRSHTYCPRCQTRPRRHR
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgccagagctgcccgaggtcgaggtggtgcgcgccggtctcgcccggcacgtggccgga
cgcaccgtcacccgcgtcgaggtttttgacccgcgtccgctgcgccgccaggacggggga
gcgcaggccttcgtcgaccagctcaccgggcgcaccctgaccgcggccgtccgccgcggg
aagttcctgtggctgcccctggatgacggacgcgccctgtcggcccacctgggcatgagc
ggccagctgctcgtgcgcggcaccaccgtcgcgaccgctcctgacgctgccccggagtcc
caccgtgccgcggccttcctggccgatccggacactctgcccggcgggcgcccagcggac
ctgagtgctaccgagcagccccgctacgtgcgggacatctccacctctgcccgccacctg
cgagtgcgcctccacctcagcaccggcctcggcggcgataactgtgacaacggcgccggc
gcggcggtcctcgacctggtcgaccagcgcatgctcggtggcctgcacgtcgtcgacctg
atccccaccgccgacggcgctcccggcgggatgggcgacccgcggccgctgctgcccgcc
gacgccacccatatcgcccgtgacctgctcgacccggccctgcagctggccggccccacc
ggcgtcgtcgcccgggtacgcgcctcgaggcgcgccatcaagacccagctgctcgaccag
ggacttgtctcgggcatcggcaacatctacgccgacgagggcctgtgggaggccggggtg
cacggcctgcgcccgggaaccggtctcggcccgcgggtggtggcccgaatccttgagtcc
accgctgaggtcatgcgccgggcccttgaggtcggtggcacgagcttcgatgccctctac
gtcgatgtcgagggtgccgccgggttcttcgcccgcgagctgggcgcctacgggcgccat
gggctggagtgccgccgctgcggggccaccatggcgcgtgagactctgggaggtcgctct
cacacctactgcccccgttgccagacccgtccgcgccggcaccggtag
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