Actinomyces sp. HMT 175: JJJ14_06585
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Entry
JJJ14_06585 CDS
T10480
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
achn Actinomyces sp. HMT 175
Pathway
achn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
achn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JJJ14_06585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
achn03021
]
JJJ14_06585
03400 DNA repair and recombination proteins [BR:
achn03400
]
JJJ14_06585
Enzymes [BR:
achn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JJJ14_06585
Transcription machinery [BR:
achn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JJJ14_06585
DNA repair and recombination proteins [BR:
achn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JJJ14_06585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
QQQ58221
LinkDB
All DBs
Position
complement(1542844..1543242)
Genome browser
AA seq
132 aa
AA seq
DB search
MLGTSPQPEGITNPPIDDLLEKVDSKYGLVVEAAKRARQINTYTQQLEDNQFEFFGPLVD
SEVGEKSLGIALREIAEDKLEVIPGDVARARRAEAEEARRAAEADMFSDISLDAPVSLEG
GETPTSLDDIQF
NT seq
399 nt
NT seq
+upstream
nt +downstream
nt
atgctcggaacctctccccagcccgagggcatcaccaacccgccgatcgacgaccttctg
gagaaggtcgattccaagtacgggctcgtggtggaggccgccaagcgcgcccgccagatc
aacacctacacccagcagctcgaggacaaccagttcgagttcttcggtccgctggtcgac
tccgaggtcggcgagaagtccctgggcatcgctctgcgtgagatcgccgaggacaagctc
gaggtcatccccggggacgtggcccgagcccgccgcgccgaggccgaggaggcccgtcga
gccgcggaggctgacatgttcagcgacatctcgctggatgccccggtgtccctcgagggc
ggcgagactcccaccagcctcgacgacatccagttctga
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