Actinomyces sp. HMT 175: JJJ14_06765
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Entry
JJJ14_06765 CDS
T10480
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
achn Actinomyces sp. HMT 175
Pathway
achn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
achn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JJJ14_06765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
achn03019
]
JJJ14_06765
03009 Ribosome biogenesis [BR:
achn03009
]
JJJ14_06765
Enzymes [BR:
achn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
JJJ14_06765
Messenger RNA biogenesis [BR:
achn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JJJ14_06765
Ribosome biogenesis [BR:
achn03009
]
Prokaryotic type
rRNA helicases
JJJ14_06765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
adh_short
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QQQ58255
LinkDB
All DBs
Position
1585201..1587810
Genome browser
AA seq
869 aa
AA seq
DB search
MTHSSSTAPGASDAQSKDGNGPLSLDALFSAELSGGEQTGPTKNDEESTVAAPHHRDGTT
SSPEDFATPASSDSPEDPEDVDHEEEADDVDRDLPEADPEDGIDDSDEDDGVDIDEDEVD
GHTPFIDTDADSNTDSDSHQRDVERAASPRDRDKSEVRTAHEDEEITFADLGLPGDLLKA
VTDMGFVTPTAIQKEAIPVLLAGRDVVGVAQTGTGKTAAFGLPLLDAVDSRDNVVQALVL
APTRELALQSAEAITDMAARSRGLEVVAVYGGAPYGPQIGALKGGAQVVVGTPGRVIDLI
DKGALQLDDVRYFVLDEADEMLRMGFAEDVETIAESLPADRRTALFSATMPPAIQAVARQ
HLHEPVQVEVSRPASTVATVHQTYAVVPFRHKIGAVSRVLAVTDAEAAIVFVRTKSTAED
VAIELAGRGIQAAAISGDVPQRERERLVERLRAGTLDVLVATDVAARGLDVDRIGLVVNF
DVPREAEAYVHRIGRTGRAGRHGEAVTFLTPKEKGKLRQIERLTGSRLEEITLPSPADVS
EHRARKLLSKAAARHERGRLDMYLPLVADSAQELDIDVEELAATLLALAVGDEGPRRRED
RGGERPQRARREENLDSEGTFLSASFEGGREKGRRAERGDRGEGRRSATRSGRREHEGPG
TVYRVEVGHRDRVLPGAIVGALANEGGIEGSDIGKIDILQSFSLVTIYADLSPEQLSVMG
RATFAGRELRIRPDEGPGHGWSGPNGAERRPKRRDWEDRKDRGDRSDRGERSERGFRPRR
EDGERGWKDRDGRGGRGGYDRSERGERRDNRRWDERRGDRDGFRGRREDRGGRGYNRDGH
RGERRGYGERNQNRFGGHRGGFRGGRGER
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgactcactccagcagtactgcgcctggcgcctccgacgctcagagcaaggacggcaac
ggccccctcagcctcgatgcgctcttctccgccgagctctccggcggcgagcagaccggc
ccgaccaagaacgacgaggagagcactgtcgccgcgccgcaccaccgcgacggcaccacc
tcctcccccgaggacttcgccactcccgcctcctccgattcccctgaggacccggaggac
gtcgaccacgaggaggaggcggacgacgtcgaccgagacctccccgaggccgacccggag
gacgggatcgacgactccgatgaggacgacggcgtcgacattgatgaggacgaggttgac
ggccacacccccttcatcgacaccgatgccgattccaacactgactccgacagccaccag
cgcgacgtcgagcgcgccgcctcgccgcgcgaccgggacaagagcgaggtgaggaccgct
cacgaggatgaggagatcaccttcgccgacctgggtcttcccggtgacctgctcaaggcc
gtcaccgacatgggcttcgtgacccccaccgccatccagaaggaggcgatcccggttctg
ctggccggccgtgacgtcgtcggcgtcgcccagaccggaaccggcaagacggcggccttc
gggcttccgctgctcgacgccgtcgactcgcgtgacaacgtcgttcaggcgctcgttctg
gcccccacccgcgagctcgcgctccagagcgccgaggccattaccgacatggccgcccgc
tcccgcggactggaggtggtggccgtctacggcggcgccccctacggcccccagatcggc
gcgctcaagggcggcgcccaggtcgtcgtcggcactcccggccgcgtcatcgacctcatt
gacaagggcgcgctccagctcgacgacgtgcgctacttcgtgctggacgaggccgacgag
atgctgcggatgggcttcgccgaggacgtggagacgattgcggagtctcttcccgccgat
cggcgcaccgccctgttctccgcgacgatgccgccggccatccaggccgtggcgcgccag
cacctccacgagcccgttcaggtcgaggtctccaggccggcctccactgtcgccaccgtc
caccagacctacgcggtggttcccttccgtcacaagatcggcgccgtctcccgggtcctg
gccgtcaccgacgccgaggccgccattgtcttcgtacggaccaagtccacggccgaggac
gtcgccatcgagctggcgggccggggcatccaggccgccgcgatctccggtgacgtgcct
cagcgcgagcgcgagcgcctggtggagcggctgcgcgccggcaccctcgacgtgctggtg
gccacggacgtcgccgcccgaggcctggacgtcgaccgcatcggcctggtggtcaacttc
gacgtgccccgcgaggccgaggcctacgtgcaccgtatcggtcgcacgggccgcgccggc
cgccacggcgaggccgtcaccttcctgacccccaaggagaagggcaagctccgccagatc
gagcgcctcaccggaagccgtctggaggagatcaccctgccctcccccgcggacgtctcc
gagcaccgcgcccgcaagctcctgtccaaggcagccgcccgccacgagcgcggccgtctg
gacatgtacctgccgctggtcgccgactccgcccaggagctggacatcgacgtcgaggag
ctggcggccacgctgctggccctggccgtgggagacgagggaccgcgcaggcgcgaggac
cggggcggtgagcgcccgcagcgcgcccgccgggaggagaacctcgactccgaggggacc
ttcctgtcggcctccttcgaaggcggccgggagaagggccgtcgcgcagagcgaggagac
cgcggcgagggacgccgctcggccacgcgttccgggcgccgcgagcacgagggccctggg
accgtctaccgcgtggaggtcgggcaccgcgaccgggtcctgcccggagcgatcgtgggc
gcgctggccaacgagggcggtatcgagggctccgacatcggcaagatcgacatcctccag
tccttctccctggtcacgatctacgccgacctcagccccgagcagctgagcgtcatgggg
cgggcgacctttgccggccgcgagctgcgaatccgtcccgacgagggtccggggcacggc
tggtccggccccaacggcgccgagcggcgtcctaagcggcgtgactgggaggaccgcaag
gaccgtggcgaccgcagcgaccgcggcgagcggtcagaacgcggtttccgtccccgccgt
gaggacggcgagcgcggttggaaggaccgtgatgggcgcggcggcaggggcggctacgac
cgctcggagcgcggggagcgccgtgacaaccgtcggtgggatgagcgccgtggcgatcgg
gacggcttccgtggccggcgcgaggaccggggtggccgcggctacaaccgcgacgggcac
cggggcgagcgccgtggctacggcgagcgcaaccagaaccgcttcggcggccaccggggc
ggcttccgtggagggcgcggcgagcgctga
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