Actinomyces sp. HMT 175: JJJ14_09085
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Entry
JJJ14_09085 CDS
T10480
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
achn Actinomyces sp. HMT 175
Pathway
achn03420
Nucleotide excision repair
achn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
achn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JJJ14_09085
03430 Mismatch repair
JJJ14_09085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
achn03400
]
JJJ14_09085
Enzymes [BR:
achn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JJJ14_09085
DNA repair and recombination proteins [BR:
achn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JJJ14_09085
MMR (mismatch excision repair)
Other MMR factors
JJJ14_09085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_11
AAA_12
AAA_30
Secretin_N_2
ResIII
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
QQQ58666
LinkDB
All DBs
Position
complement(2156272..2159184)
Genome browser
AA seq
970 aa
AA seq
DB search
MNAMNSLFGALPMPGSGGTATPPPEAALPALVPTAGSFDDDSWAEVEAPEEDWGPEDAPP
PEDESAAAPTWEERQDEVSALVARAQANAAAARARADGAAPSGRLTGPAWGVTVSDPAEL
IRGLNPAQEAAVTHAGAPLLIIAGAGSGKTRVLTHRIAHLIATGRARPGEILAITFTNKA
AAEMRERVTALVGPAGERMWVSTFHSACVRILRREHEAAGLRSTFSIYDAADSTRLITLI
VRELGIDPKRFTPKTFAHRISDLKNELITPAQFAERAVTSNPLERHLAEVYRAYAQRLSA
ANALDFDDIIMRTVALLQTRPAVAEMYRRRFRHILVDEYQDTNHAQYVLVRELVGGPGTS
GAGSALPPGELTVVGDSDQSIYAFRGATIRNIEEFEEDYPSARTILLEQNYRSTQNILSA
ANAVISRNSGRREKNLWTAAGDGAPITGYVADSEHDEARWISQEVDRLADEHGVRPRDVA
VFYRTNAQSRALEEAFMRAGQPYKVIGGTRFYDRREIKDAIAYLRAVDNPDDDVNLRRIL
NVPKRGLGDKAEGALAEHAARYSVSFGQAVADAAGAPRETQTGETEETDGQDTSTTGAGE
PPEVEGLTTRARNQVRGFHELLTTLRHMVTAGDGVADILDSALDASGYLAELRASDDPQD
ATRVENLAELHSVASDFQAANPDGTLADFLERVSLVADSDQLPPSADLEDEDARQAEEQG
QITLMTVHTAKGLEFPVVFVTGMEEGTFPHSRSLTEETELAEERRLAYVALTRARERLYL
TRAAVRSAWGAANAMPASRFLDDVPDDTIDWKRLASSMEALRGGGTGWGSSWGEGGFGSG
GRRSGSSRQGSYSDDDDFAPPVGAGTKRSGKLGRVETAQDRAAKRASARLEARGKQGDSS
PAGAAASEDLPAAVAGLRAGDQVRHDSYGVGTVVGLEGKGRSLTARVEFVIDGAPTTKRL
ILRYAPVAKI
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgatgaactccctcttcggcgccctgcccatgcccggctccggcggtacggcc
acaccgccgcccgaggctgcgctgcccgccctcgtccccaccgcaggctccttcgacgat
gactcctgggccgaggtcgaggccccggaggaggactggggtcccgaggacgccccaccg
cccgaggacgagtccgccgcagcccccacctgggaggagcgtcaggacgaggtctccgct
ctggtcgcccgcgcccaggccaatgccgccgcggcccgcgcccgggctgacggcgccgcg
ccctcgggccggctcaccggcccggcctggggcgtcacagtctcagacccggccgagctc
atccgtggcctcaaccccgcccaggaggccgccgtcacccacgccggcgcccccctgctc
atcatcgccggcgcgggctcgggcaagacccgggtcctgacccaccgcatcgcccacctc
atcgccaccggacgcgcccgccccggcgagatcctggccatcaccttcaccaacaaggcc
gccgccgagatgcgcgaacgcgtcaccgccctggtcgggccggccggcgaacgcatgtgg
gtctccaccttccactccgcctgtgtgcgcatcctgcgccgcgagcatgaggccgccggc
ctgcgctccaccttctccatctacgatgccgccgactccacccgcctcatcaccctcatc
gtgcgtgagctgggcatcgaccccaagcgcttcacccccaagaccttcgcccaccgcatc
tccgacctcaagaacgagctcatcaccccggcccagttcgccgagcgggccgtcacctcc
aaccccctcgagcgccacctcgccgaggtctaccgcgcctacgcccagcgcctgagcgcc
gccaacgccctggacttcgacgacatcatcatgcgcaccgtcgccctgctccagacccgc
ccagccgtggccgagatgtaccggcgccgcttccgccacatcctggtcgacgagtaccag
gacaccaaccacgcccagtacgtcctcgtgcgcgagctcgtcggcggccccggcacctcc
ggggccggctcagccctgccaccgggcgagctcaccgtcgtcggcgactccgaccagtcc
atctacgccttccgcggcgccaccatccgcaacatcgaggagttcgaggaggactacccc
tcggcgcgcaccatcctgctggagcagaactaccgctccacccagaacatcctctcggcc
gccaatgccgtcatctcccgcaacagcggccggcgcgagaagaacctgtggaccgccgcc
ggcgacggcgcccccatcaccggctacgtcgccgactccgagcacgacgaggcccgctgg
atcagccaggaggtcgaccgactggccgacgagcacggcgtgcgcccccgtgacgtcgcg
gtcttctaccgcactaacgcccagtcccgcgccctcgaagaggccttcatgcgcgccggc
cagccctacaaggtcatcggcggcacccgtttctacgatcgccgcgagatcaaggacgcc
atcgcctacctgcgcgccgtcgacaaccccgacgacgacgtcaacctgcgccgcatcctc
aacgtccccaagcgcggcctgggcgacaaggccgagggtgccttggccgagcacgccgcc
cgctactccgtctccttcgggcaagccgtcgccgacgccgccggagccccccgtgagacc
cagaccggcgagaccgaggagaccgacgggcaggacacctccaccaccggggccggtgag
ccgcccgaggtcgagggcctgaccacccgggcccgcaaccaggtgcgcggcttccatgag
ctgctcaccaccctgcgccacatggtcaccgccggcgacggcgtcgccgacatcctcgac
tccgccctggacgcctcgggctacctcgccgagctgcgcgccagcgacgacccccaggac
gccacccgcgtggagaacctcgccgagctccactccgtggccagcgacttccaggccgcc
aaccccgacggcaccctggccgacttcctcgaacgcgtctcactcgtggccgactccgac
cagctcccacccagcgccgacctggaggacgaggacgcccggcaggccgaggagcagggc
cagatcaccctcatgaccgtccacaccgccaagggcctggagttcccggtcgtcttcgtc
accggcatggaggaaggtaccttcccccacagccgctccctgaccgaggagaccgagctc
gccgaggaacggcgcctggcctacgtggccctcacccgcgcccgcgagcgcctctacctc
acccgcgccgccgtgcgctcggcctggggagccgccaacgccatgcctgcctcccgcttc
ctcgacgacgtgccggatgataccatcgactggaagcgcctggcctcctccatggaggcg
ctgcgcggcggcggcaccggctggggcagcagctggggcgagggcggcttcggctcgggt
gggcggcgctcaggctcctcccggcaaggctcctactccgacgacgatgacttcgccccg
cccgtgggcgcaggaaccaagcgctcgggcaagctggggcgcgtggagaccgcccaggac
cgggccgccaagcgcgcctccgcccgcctcgaggcccgcggcaagcagggcgactcctca
ccggccggcgctgccgcctcggaggatctgccggcagccgtcgccgggctgagggccgga
gaccaggtgcgccacgactcctacggggtgggcaccgtcgtcggcctggagggcaaggga
cggtccctgaccgcccgcgtcgagttcgtcatcgacggcgcccccaccaccaagcgcctc
atcctgcgctacgcccccgtcgccaagatctga
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