Actinomyces sp. HMT 175: JJJ14_09465
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Entry
JJJ14_09465 CDS
T10480
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
achn Actinomyces sp. HMT 175
Pathway
achn03020
RNA polymerase
Brite
Enzymes [BR:
achn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JJJ14_09465
Transcription machinery [BR:
achn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JJJ14_09465
DNA repair and recombination proteins [BR:
achn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JJJ14_09465
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QQQ58733
LinkDB
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Position
complement(2259744..2263697)
Genome browser
AA seq
1317 aa
AA seq
DB search
MLDANVFDRIQLGLATAEDIRSWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
ACGKYKRVRYKGIVCERCGVEVTRSKVRRERMAHIKLAAPVTHIWYFKGVPSRLGYLLNL
APKDLEKVIYFAAYMVTEVDEEGRHDDLPSLRNELEVKKKHLEESGQAEVEARQQRLEED
LAQLESEGAEASQRDKLRKTAEREITAMRRRNQRALEHMDKVWDRFVSLKVGDLEGDEVL
YRDMVADYGIYFKGSMGAEAIQARLRSFDLEAEASALAEIVENGTGQRKTRAIKRLKVVN
AFRMTGTAPESMVLDNIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLMDL
GAPTIIVNNEKRMLQDAVDALFDNGRRGRPVTGVGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPSQMALELFKPFVMKRLVELKEAQNVKAAKRMVERAN
PKVWDVLAEVIREHPVLLNRAPTLHRLGIQAFEPQLIEGKAIQLHPLVCGAFNADFDGDQ
MAVHLPLGAEAQAEARILMLSSNNILKPSDGRPVTMPSQDMIIGTYYLTSDPDPAVEVER
DAEGNEIVPAFSSFAEAVMAYDFGKLHVNAACDIRFEEGIAAPEGWQPPEGWSEGDPITL
RTSLGRALFNTSLPETFPYVNYIVDKKQLGNIVNALAENYSRVEVAASLDALKANGFYWS
TWSGITVAFADVVSPEAKQEILVRYENEAAEIEEQFELGALTEDDRYASLIDIWTKATAE
VAEAMRENFPQRNTVYQMVVSGARGNWDQIRQLAGMRGLVADPKQRLIERPIKSNYREGL
SVLEYFIATHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREEDCGTRKGLTKRIFSW
IDAGDERIKEPSEILGTTVFGTTLARDAIDAEGNLIIEAGADLGDAEIRAAIDAGIEEIT
VRSVLTCDSNVGTCAACYGRSLATGKRVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGAA
GAADITQGLPRVQELFEARTPKGEAAVAEAAGTLKIEDDADGKRLVITRDDGEEDVIVPV
SRRQRLLVNDGDHVEPGQALTEGPVDPKKVLRLRSVAATQRHLVEEVQEVYRSQGVDIHS
KHIEVIVRQMLRRVTVLDSGDTRLLQGDLVDVMHYRAENRRVMAEGGKTATGRTELMGIT
KASLATDSWLSAASFQETTRVLTEAAMNGKSDPLLGLKENVILGKLIPAGTGLARYSDIE
VEPTEEVKAEVFSRVDLGDGVFGESVALDDFHFGGDLRADFSDDFRTGFSSSEDVEF
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgccaacgtgttcgacaggatccagctcggcctcgccaccgcggaggacatt
cgctcgtggtcccacggcgaggtcaagaagcccgagaccatcaactaccgcaccctcaag
cccgagaaggacggcctcttctgcgagaagatcttcggccccacccgggactgggagtgc
gcctgcggcaagtacaagcgcgtgcgctacaaggggatcgtctgcgagcgctgcggagtc
gaggtcactcgctccaaggtgcgtcgcgagcgcatggcccacatcaagctcgccgcgccg
gtcacccacatctggtacttcaagggcgtgccctcgcgcctgggctacctgctcaacctc
gcgcccaaggacctggagaaggtcatctacttcgcggcctacatggtcaccgaggtggat
gaggagggccgccacgacgacctgccctccctgcgcaacgagctggaggtcaagaagaag
cacctcgaggagtccggccaggccgaggtcgaggcgcgccagcagcgcctcgaggaggac
ctcgcccagctcgagtccgagggcgccgaggcctcccagcgcgacaagctccgcaagacc
gccgagcgcgagatcacggccatgcgccgccgcaaccagcgcgccctggagcacatggac
aaggtgtgggaccgcttcgtgagcctcaaggtcggtgacctggagggtgacgaggtcctc
taccgcgacatggtcgccgactacggcatctacttcaagggctccatgggcgccgaggcc
atccaggcccgcctgcgcagcttcgacctcgaggccgaggcctccgccctggccgagatc
gtcgagaacggcaccggccagcgcaagacccgcgccatcaagcgcctcaaggtcgtcaac
gccttccgcatgaccggcaccgccccggagtcgatggtcctggacaacattccggtcatc
ccgccggacctgcgccccatggtccagctcgacggtggccgcttcgccacgtccgacctc
aacgacctctaccgccgcgtcatcaaccgcaacaaccgcctcaagcggctcatggacctg
ggcgccccgacgatcatcgtcaacaacgagaagcgcatgcttcaggacgccgtcgacgcc
ctgttcgacaacggccgccgcggccgcccggtcaccggcgtgggcaaccgtccgctgaag
tccctgtccgacatgctcaagggcaagcagggccgcttccgccagaacctcctgggcaag
cgcgtggactactccggccgtagcgtcatcgtcgtcggcccccagctcaagctccaccag
tgcggtctgcccagccagatggccctggagctgttcaagcccttcgtcatgaagcggctc
gtcgagctcaaggaggcccagaacgtcaaggccgccaagcgcatggtcgagcgcgccaac
cccaaggtctgggacgtcctggccgaggtcatccgcgagcaccccgtgctgctcaaccgc
gcccccaccctgcaccgcctgggcatccaggccttcgagccccagctcatcgagggcaag
gccatccagctgcacccgctcgtgtgcggcgccttcaacgccgacttcgacggcgaccag
atggccgtccacctcccgctgggcgccgaggcgcaggccgaggcccgcatcctcatgctg
tcctcgaacaacatcctcaagccctccgacgggcgccccgtgaccatgcccagtcaggac
atgattatcggcacctactacctcacctccgaccccgacccggcggtcgaggtcgagcgc
gacgccgagggcaacgagatcgtcccggccttctcctccttcgcggaggcggtcatggcc
tacgacttcggcaagctccacgtcaacgctgcctgcgacatccgcttcgaggagggcatc
gccgctcccgagggctggcagccgcccgagggctggagcgagggcgacccgatcaccctg
cgcacctcgctgggtcgggccctgttcaacacctcgctgcccgagaccttcccctacgtc
aactacatcgttgacaagaagcagctgggcaacatcgtcaacgccctggcggagaactac
tcgcgcgtcgaggtcgcagcctccctggacgccctcaaggccaacggcttctactggtcc
acctggtccggtatcaccgtcgccttcgccgacgtcgtctccccggaggccaagcaggag
atcctcgttcgctacgagaacgaggccgctgagatcgaggagcagttcgagctcggtgcc
ctcaccgaggacgaccgctacgcctccctcatcgacatctggaccaaggccacggccgag
gtcgccgaggcgatgcgcgagaacttcccgcagcgcaacaccgtctaccagatggtggtc
tccggggcccgaggcaactgggaccagatccgccagctcgccggtatgcgtggactggtg
gccgaccccaagcagcgcctcatcgagcgcccgatcaagtcgaactaccgtgagggcctg
agcgtcctggagtacttcatcgccacccacggcgcccgtaagggcctggcggacacggcg
ctgcgtaccgccgactccggctacctcacgcgtcgtctggtcgacgtctcccaggacgtc
atcgtccgcgaggaggactgcggcacccgcaagggcctgaccaagcggatcttctcctgg
atcgacgccggtgacgagcgcatcaaggagccctcggagatcctgggcaccaccgtgttc
ggcaccaccctggcgcgcgatgccatcgacgccgagggcaacctcatcatcgaggccggc
gccgacctgggcgacgccgagatccgggccgccatcgacgcgggcatcgaggagatcacg
gtgcgctccgtgctcacctgcgactctaacgtcggcacctgcgccgcctgctacggccgc
tcgctggccaccggtaagcgcgtcgacatcggtgaggccgtcggcatcatcgccgcccag
tccatcggtgagcccggcacgcagctgaccatgcgtaccttccacaccggtggtgcggcc
ggcgccgccgacatcacccagggtctgccccgtgtgcaggagctcttcgaggcccgcacc
cccaagggcgaggccgccgtggccgaggccgccggcaccctcaagatcgaggacgacgcc
gacggcaagcgcctggtcatcacccgcgacgacggcgaggaggacgtcatcgtcccggtc
tcgcgccgtcagcgcctgctggtgaacgacggggaccacgtcgagcccggccaggccctc
accgagggtccggtcgaccccaagaaggtcctgcgcctgcgctcggtggccgccacccag
cgccacctcgtcgaggaggtccaggaggtctaccgctcccagggcgtggacatccactcc
aagcacatcgaggtcatcgtgcgtcagatgctgcgccgcgtgaccgtgctggactccggg
gacacccgtctcctccagggagacctcgtggacgtcatgcactaccgcgccgagaaccgc
cgggtcatggccgagggcggcaagaccgccaccggccgtaccgagctcatgggaatcacc
aaggcctcgctggccacggactcctggctgagcgccgcctccttccaggagaccacgcgc
gtgctcaccgaggccgccatgaacggcaagtccgacccgctgctgggcctcaaggagaac
gtcatcctcggtaagctcatccccgccggtacgggcctggcccgctactcggacatcgag
gtcgagcccaccgaggaggtcaaggcggaggtcttctcccgcgtggacctgggagacggc
gtcttcggcgagtccgtcgccctggacgacttccacttcggtggggacctgcgtgcggac
ttctccgacgacttccgcaccggcttctccagcagcgaggacgtcgagttctga
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