Achromobacter sp. 77: H4P35_01870
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Entry
H4P35_01870 CDS
T08458
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
acho
Achromobacter sp. 77
Pathway
acho03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
H4P35_01870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acho03400
]
H4P35_01870
Enzymes [BR:
acho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H4P35_01870
DNA repair and recombination proteins [BR:
acho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H4P35_01870
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
AAA_30
AAA_22
AAA_16
nSTAND_NTPase5
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
UDG76137
LinkDB
All DBs
Position
410354..412459
Genome browser
AA seq
701 aa
AA seq
DB search
MSPDSLPDAQVKPDSSAVCWVRVALDVPLPGPFDYRSDAPIAVGLRVIVPFGRRKMIGVV
VDNPAEPSFEPKQIRPIEAVLDDLPPFDEAWLRMARFAADYYQRPLGEVMLPTLPPPLRK
PTSYQGKRSGEGPVARMDARKRKTVRAPATPDQPPALNDAQEAAVQAIAALDGFKPVLLH
GVTGSGKTEVYLRAAEQVLAAGRQVLLLVPEINLTPQLEAALRARLESLVGSEGLAVMHS
GLSDGERLQAWTRAHRGQARMLLGTRMSIFAPLTQLGLIVVDEEHDASYKQQDGLRYSAR
DLAVWRAHDLNIPVVLGSATPSLETWQHAERGRYLRLTLPGRARSSELPKIRLVDTRRLQ
MKQGLSPQLVEAIGQRLERKEQVLIFLNRRGYSPVLHCQSCAWVSNCPRCTAFTVLHRTD
GRGHRLQCHHCGYQAPVPRACPECGDQDLAPMGRGTQRVEEHLAELFPEARILRIDADST
RKKGSAEALFASVHAGEVDILVGTQMVAKGHDFARLGLVGVLNADSMLFAHDFRAPERLF
AQLMQVAGRAGRHQGNGEVLIQTGYPEQPVYQALLRHDYAGFARHALHERESTGLPPFVY
QALLTAEARELKVAQAFLEQARVLPEGEWAVDFPGMDAIMLYDPVPLRVVRVANIERAQL
LAESSSRPALQAFLASWSHHLPYLANEARVRWQLEVDPLEI
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgtcccccgattccctgcctgacgcgcaagtaaagcccgactcctcagcggtgtgctgg
gttcgcgtcgcgctggacgtgccgttgcccggcccgtttgattaccgcagcgatgcgccg
atcgccgtgggcctgcgggtgatcgttccgttcggccggcgcaagatgattggggtggtc
gtcgacaatcccgccgaaccttctttcgagcccaaacagatccggcccatcgaggcggtg
ctggacgatctgccgccgttcgacgaggcgtggttgcgcatggcgcgctttgccgccgac
tactatcagcggcccctgggtgaggtgatgctgcccacgctgccgccgccgctgcgcaag
cccacgtcctatcagggcaagcggtccggggaagggcccgtggcgcgcatggatgcgcgc
aagcgcaagaccgtgcgcgcgccggccacgcccgaccagccgcccgcgctgaatgacgcg
caggaagccgcggtgcaagccattgccgcgctggacggattcaagccggtgctgctgcat
ggcgtgacgggaagcggcaagaccgaggtctacctgcgtgccgccgaacaggtcctggcg
gcggggcggcaggtgctgttgcttgtcccggaaatcaacctgacgccgcagcttgaggcc
gcgctgcgggcgcgcctggagtcgctggtcggatccgaggggctggcggtcatgcacagc
ggcctgtccgacggcgagcggctgcaggcctggacccgcgcccatcgcggacaagcccgc
atgctgctgggcacgcgcatgtcgatcttcgcgccgctgacgcagctggggctgatcgtg
gtcgacgaagaacacgatgcgtcctacaagcagcaggacggactgcgttattcggcgcgc
gacctggccgtgtggcgcgctcatgatctgaacatcccggtcgtgctgggctcggccacg
ccgtcgctggagacctggcagcacgccgagcgcggccgctacctgcgcctgacgctgccg
ggccgcgcccgatccagcgaactgcccaagatccggctggtggacacgcgccgcctgcaa
atgaagcaaggcctgtcgccgcagctcgtcgaggccatcggccagcggctcgagcgcaag
gaacaggtgctgatcttcctgaaccggcgcggctattcgcccgtcctgcactgccagtcc
tgcgcctgggtcagcaactgcccgcgctgcacggcctttaccgtgctgcatcgcaccgat
ggccgcggccatcgcctgcagtgccatcactgcggttaccaggctcccgtgccgcgcgcc
tgccccgaatgcggcgaccaggacttggcgccgatgggccgcggcacccagcgtgtcgag
gaacacctggccgaactctttcccgaggcgcgcatcctgcgcatcgacgccgacagcaca
cgcaagaagggcagtgccgaggcgctgttcgcgtccgtgcacgccggcgaggtcgacatt
ctggtgggcacgcagatggtggccaagggccacgactttgcgcggctgggactggtgggc
gtgctgaacgcggattcgatgctgttcgcccatgatttccgcgcgcccgagcgcctcttt
gcgcaactgatgcaggtggctggccgcgcgggccgccaccagggcaacggagaagtcctg
attcagaccggctaccccgagcagccggtgtaccaggccctgctgcgccacgattacgcc
ggattcgcgcgccacgcgctgcacgagcgcgaaagcaccgggcttccgcccttcgtttat
caggcgctgctgaccgccgaagcgcgcgagctcaaggtggcccaggcgttcctggagcag
gcgcgcgtgctgcccgagggcgagtgggccgttgattttccgggcatggacgcgatcatg
ctgtatgaccccgtgccgctgcgcgtggtccgcgtggccaacatcgagcgggcccaactg
ctggctgaaagcagcagccggccggccctgcaggcgtttctggcttcgtggtcgcaccac
ctgccttatctggccaacgaggcgcgcgtgcgctggcaactggaagtcgatccgctggaa
atctga
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