Achromobacter sp. 77: H4P35_05045
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Entry
H4P35_05045 CDS
T08458
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
acho
Achromobacter sp. 77
Pathway
acho03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acho00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H4P35_05045 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acho03019
]
H4P35_05045 (pnp)
03016 Transfer RNA biogenesis [BR:
acho03016
]
H4P35_05045 (pnp)
Enzymes [BR:
acho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
H4P35_05045 (pnp)
Messenger RNA biogenesis [BR:
acho03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
H4P35_05045 (pnp)
Transfer RNA biogenesis [BR:
acho03016
]
Prokaryotic type
tRNA degradation factors
H4P35_05045 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH_2
OB_RRP5_4th
KH-I_KHDC4-BBP
KH_KhpA-B
KH_SLS1_2
OB_PDCD11
KH_NusA_2nd
S1_TP0910
DUF5813
Motif
Other DBs
NCBI-ProteinID:
UDG76720
LinkDB
All DBs
Position
1118132..1120294
Genome browser
AA seq
720 aa
AA seq
DB search
MFNKVTKSFQYGQHTVVLETGEIARQASGAVVVSIEDTVVLATVVAAKKAKPGQTFFPLT
VDYIEKTYAAGRIPGGFFKREGKPSEKETLTSRLIDRPLRPLFPEDFYNEVQVVLHTLSV
NPEIDPDIAAMIGASAALAISGIPFNGPIGAARVGYIDGQYTINPTASELKSSKLNLVVA
GTENAVLMVESEADQLSEEVMLGGVVYGHQQMQAVINAIHDLVKDAGKPDWDWQAPAKDE
ALIAAVTAAGQEGLNAAYQIREKQARTAKLREVSAEVSAKLAAAAAEKGESAPDAVTVDN
IMFSLESAIVRGQILNGEPRIDGRDTRTVRPISVRLGVLPRAHGSALFTRGETQALVVAT
LGTKQDEQIIDALMGEYRDRFMMHYNMPPFATGETGRIGVPKRREIGHGRLAKRSLVPVL
PAPEDFQYTIRLVSEITESNGSSSMASVCGGSLAMMDAGVPIKDHVAGVAMGLILDGGKF
AVLTDILGDEDHLGDMDFKVAGTENGVTALQMDIKIQGITKEIMQVALDQAREGRLHILG
KMKEALDGSRGELSAFAPRMLTIKINPEKIRDVIGKGGATIRALTEETGTQIDISDDGTI
VIASVDEAQAKEAQRRIVELTADVEVGQIYEGSVLRLLDFGAIVQVLPGRDGLLHISEIA
NYRIANINDVLKVGQQVRVKVIEADDKGRLRLSIKAIGGIEQQQAAAAPEAAPQSEPQAE
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaaagtgactaaatcgttccagtacggccagcatacggtcgtcctggaaact
ggcgagatcgctcgccaggcctccggcgccgttgtggtgtcgatcgaggacaccgtcgtc
ctggccaccgtcgtggctgccaagaaggccaagccgggtcagacgttcttcccgctgacc
gtcgactacatcgaaaagacctacgccgccggccgtatcccgggcgggttcttcaagcgc
gaaggcaagccctccgaaaaggaaacgctgacgtcgcgcctgatcgaccgtccgctgcgt
ccgctgttccccgaagacttctacaacgaagtccaggtggtcctgcacacgctgtcggtc
aatcctgaaatcgatcccgacatcgccgccatgatcggcgcctcggccgcgctggccatc
tccggcatcccgttcaatggcccgatcggcgccgcgcgcgtgggttacatcgatggtcaa
tacaccatcaacccgaccgcatcggaactgaagtcctccaagctgaacctggttgtcgcc
ggtacggaaaacgccgtgctgatggtcgaatcggaagctgaccaactgtccgaagaagtc
atgttgggcggcgtggtctatggccaccagcaaatgcaggccgtcatcaatgccatccac
gacctcgtgaaggacgctggcaagcccgattgggattggcaagctcccgccaaggacgag
gccctgatcgccgcggtcaccgccgccggccaggaaggcctgaatgccgcctaccagatc
cgcgaaaagcaggcccgcacggccaagctgcgtgaagtgtcggccgaagtgtcggccaag
ctggccgccgccgccgccgaaaagggcgaatcggctccggacgccgtcacggtcgacaac
atcatgttctcgctggaatcggccatcgtccgcggccagatcctgaacggcgaaccgcgt
atcgacggccgcgacacccgcaccgtgcgtccgatcagcgtgcgtctgggcgtgctgccc
cgcgcgcacggcagcgcgctgttcacccgtggcgaaacccaggcgctggtcgtggccacg
ctgggcaccaagcaagacgaacagatcatcgacgcgctcatgggcgagtaccgtgaccgc
ttcatgatgcactacaacatgcctccgttcgccaccggcgaaaccggccgcatcggtgtg
cccaagcgccgcgaaatcggccacggccgtctggccaagcgttcgctggttccggtgctg
ccggcccccgaagacttccagtacacgatccgcctcgtgtcggaaatcaccgaatccaac
ggctcctcgtcgatggcctcggtctgcggcggctcgctcgccatgatggacgctggtgtg
cccatcaaggatcacgtggccggcgtggccatgggcctgatcctggacggcggcaagttt
gccgtgctgacggacatcctgggcgacgaagatcacctgggcgacatggacttcaaggtt
gcgggcaccgaaaacggcgttaccgcactgcagatggacatcaagatccagggcatcacc
aaggaaatcatgcaggttgcgctggaccaggcccgtgaaggccgtctgcacatcctcggc
aagatgaaggaagccctggacggttcgcgcggcgagctgtcggcgttcgcgccgcgcatg
ctgaccatcaagatcaaccccgagaagatccgcgacgtgatcggcaagggcggcgccacc
atccgcgcgctgaccgaagaaaccggcacgcagatcgacatctccgacgacggcacgatc
gtgatcgccagcgtcgacgaagcgcaggccaaggaagcccagcgccgcatcgtcgagctg
accgccgacgtcgaagtgggccagatctacgaaggctcggtcctgcgtctgctggacttc
ggcgccatcgtgcaagtgctgccgggccgcgacggcctgctgcacatctccgaaatcgcc
aactaccgcatcgcgaacatcaacgatgtgctgaaggtcggccagcaagtccgcgtcaag
gtcatcgaggccgacgacaagggccgcctgcgcctgtccatcaaggcgatcggcggcatc
gagcagcagcaagccgctgccgctcccgaagccgctccccaatcggaaccgcaagctgaa
taa
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