Achromobacter sp. 77: H4P35_07380
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Entry
H4P35_07380 CDS
T08458
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
acho
Achromobacter sp. 77
Pathway
acho03030
DNA replication
acho03410
Base excision repair
acho03420
Nucleotide excision repair
acho03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H4P35_07380 (polA)
03410 Base excision repair
H4P35_07380 (polA)
03420 Nucleotide excision repair
H4P35_07380 (polA)
03440 Homologous recombination
H4P35_07380 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acho03032
]
H4P35_07380 (polA)
03400 DNA repair and recombination proteins [BR:
acho03400
]
H4P35_07380 (polA)
Enzymes [BR:
acho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H4P35_07380 (polA)
DNA replication proteins [BR:
acho03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
H4P35_07380 (polA)
DNA repair and recombination proteins [BR:
acho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
H4P35_07380 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H4P35_07380 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
UDG77157
LinkDB
All DBs
Position
1609051..1611768
Genome browser
AA seq
905 aa
AA seq
DB search
MKKTLLLVDGSSYLYRAFHAMPDLRNAQGEPTGAIYGVVNMLRKLVSDYKAEYAACIFDA
RGKTFRDDLYPEYKSHRPPMPEDLAAQIDPIHRAVRALGWPVLAIEGVEADDVIGTLAHR
AAQHDVHTIVSTGDKDLAQLVNSHVTLVNTMSGEVLDEAGVVNKFGVPPDRIVDYLMLVG
DSVDNVPGVTKVGPKTAAKWITEFGSIDKLVEGAEGIKGVAGNNLREAIPNFPLTRQLLT
VKCDCDLTGHVDGVDDLTPRARDDATLTELYERYGFRTWLRDLTGDAERVPAGDARIAHE
APAAPETTDYRIISDWAAFDAWMELVQQTALVALDTETTSLDEMQARLVGLSMSVAPGVA
CYIPVAHRGPDGAVQLPKDEVLARLKPWLQDPARAKLLHHAKYDTHVFANEGIRLAGAAE
DTMLQAYVLESHRGVGLNDLAQRFLGRSGVSYEDLCGKGAKQIGFDEVAVDKAGHYAAED
ADFTLQLHQVLRPMVAADAGLERIYRLEMQVSAVLTTIERNGVKVDAAELGRQSNKLGQE
MLQLEQKAYELAGQPFNLNSPKQLGEILFGRMQLPVVRKTASGAPSTDEEVLSKLALDYP
LPQVLLEYRGLSKLKSTYTDKLPRMINPATGRVHTHYSQAAVITGRLASSDPNLQNIPVR
TEAGRRVREAFIAEQGMLLSADYSQIELRIMAHVSDDANLQSAFAAGEDIHRATASEVFG
VPLEGVTTDQRRAAKAINFGLIYGMGVFGLASNLGITRDAAQAYIDRYFARYPGVAMYME
NTRRLAREQGYVETVFGRRLQLPEIRGASGPRRQGAERAAINAPMQGTAADLIKMAMVAV
QDWLDAENLKTRMIMQVHDELVLEAPDDELQVVKEALPRLMCNVATLRVPLVAEVGVGKN
WEQAH
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaccttattactggtcgacggttcaagttacttgtaccgcgctttccacgct
atgcctgatttgcgcaacgcgcaaggcgaacctacgggtgcgatttacggcgtggtcaat
atgctgcgcaagcttgtatcggactataaggcagagtatgccgcatgtattttcgatgct
cgcggcaagactttccgggacgacctgtatccggagtacaagtcgcaccgtccgcccatg
cccgaagaccttgcagcacaaatcgatcccatccatcgcgcggtgcgcgcgctgggctgg
ccggtgctggccatcgagggtgtcgaggccgacgacgtcattggcacgttggcacatcgt
gccgcgcagcacgacgtgcacaccatcgtctctacgggcgacaaggacctggcgcagctg
gtgaacagccacgtcaccctggtcaacacgatgagcggagaggtcctggacgaggccggc
gtcgtgaacaaattcggcgtgccgcccgaccgtatcgtggattacctgatgctggtgggt
gactcggtcgacaatgtgccgggcgtcaccaaagtgggccccaagacggccgccaaatgg
attacggaatttggctccatcgacaaactggtcgaaggcgccgagggcatcaagggggtg
gccggcaacaacctgcgcgaggccattcccaatttcccgctgacgcgccagcttctgacg
gtcaagtgcgattgcgatctgaccgggcacgtcgacggcgtcgatgacctgacgccgcgt
gcgcgcgacgacgcgacgctgaccgaactgtacgaacgctacgggttccgcacctggctg
cgcgacctgaccggtgacgccgaacgggtacccgcgggcgacgcccgcatcgcgcacgag
gcgccggccgcgccggagaccaccgactaccgcatcatttccgactgggcggcgttcgac
gcctggatggaactggtgcagcagactgcgctggttgcgctggataccgagacgacgtcg
ctggacgaaatgcaggcccggctggtgggcttgtcgatgtcggtggcgcctggcgtggcc
tgctacatccccgtcgcgcatcgggggccggatggcgcggtccagttgcccaaggacgag
gtgctggcacggctcaagccgtggctgcaagacccggcgcgcgcaaagctgctgcaccac
gccaagtacgacacgcacgtgttcgccaacgaaggcatccgcctggcgggcgccgccgaa
gacaccatgcttcaggcctacgtgctggagtcgcatcgcggcgtgggcttgaacgacctg
gcgcagcgctttttgggccgcagcggcgtgtcgtacgaggatctgtgcggcaagggcgcc
aagcagatcggttttgacgaggtggcggtcgacaaggccgggcattacgcggccgaggac
gccgacttcacgctgcaactgcatcaggtgctgcgcccgatggtcgccgccgacgcgggg
ctggagcgcatctatcgcctggaaatgcaggtgtcggcggtgctgaccaccatcgagcgc
aacggcgtgaaggtcgatgctgcggaactgggccgccagagcaacaagctggggcaagag
atgctgcagctcgagcagaaggcctacgaactggcgggccagccgttcaacctgaattct
cccaagcagctgggcgagatcctgttcggccgcatgcagcttccggtggtgcgcaagacc
gcgagcggcgcgccgtccacggacgaggaagtgctgagcaagctggcgctggactacccg
ctgccgcaggtgctgctggagtaccgcgggctgtccaagctgaagtcgacgtacaccgac
aagctgccgcgcatgatcaatccggcgacgggcagggtgcatacgcattattcccaggcc
gccgtcatcaccgggcgccttgcgtcatccgatcccaacctgcagaacattcccgtgcgc
accgaggccggccggcgcgttcgcgaggcgttcatcgctgagcagggcatgctgctgtcc
gcggactattcgcagatcgagctgcgcatcatggcgcacgtctcggacgatgccaacctg
caaagcgccttcgcggcgggcgaggacatccaccgcgccaccgcctccgaagtgtttggc
gtgccgctggaaggcgtgacgaccgatcagcgccgtgccgccaaggccatcaacttcggt
ctcatctacggcatgggcgtgttcggcctggcatccaacctgggcatcacgcgcgacgcc
gcgcaggcctacatcgaccgctactttgcgcgctatccgggcgtggcgatgtacatggaa
aacacgcggcgcctggcgcgcgagcagggctacgtggaaaccgtcttcggacgccggctg
cagttgccggaaatccggggggcgtcgggtccgcgccgccagggcgccgagcgcgcggcg
atcaacgcgcccatgcaaggcacggcggccgatctcatcaagatggcgatggtggcggtg
caggactggctggacgccgaaaacctgaagacgcgcatgatcatgcaggtgcacgatgaa
ctggtgctggaagcgcccgacgacgagctgcaagtggtcaaggaagcgctgccgcgcctg
atgtgcaacgtggcgacgctgcgcgtgccgctggtggcggaagtgggcgtcggcaagaac
tgggagcaggcgcactag
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