Achromobacter sp. 77: H4P35_08280
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Entry
H4P35_08280 CDS
T08458
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
acho
Achromobacter sp. 77
Pathway
acho03030
DNA replication
acho03430
Mismatch repair
acho03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H4P35_08280 (dnaE)
03430 Mismatch repair
H4P35_08280 (dnaE)
03440 Homologous recombination
H4P35_08280 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acho03032
]
H4P35_08280 (dnaE)
03400 DNA repair and recombination proteins [BR:
acho03400
]
H4P35_08280 (dnaE)
Enzymes [BR:
acho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H4P35_08280 (dnaE)
DNA replication proteins [BR:
acho03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H4P35_08280 (dnaE)
DNA repair and recombination proteins [BR:
acho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H4P35_08280 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
RecG_wedge
Motif
Other DBs
NCBI-ProteinID:
UDG77320
LinkDB
All DBs
Position
1793005..1796496
Genome browser
AA seq
1163 aa
AA seq
DB search
MSEAVTTPTPFVHLRVHSEFSVVDGTVRIPDLIKRVAKLGQPAVALTDLSNLFGLIKFYK
GARGAGVKPIAGCDVWISNDEDPAKPFRLLLLVRNHQGYLNLCELLSKAFLTNQGKGRAE
IRREWLQGQAGLIALSGGRAGDVGQALEAGNAVSALALARQWALMFPGSYYIELQRAGMD
GDEGYCQAAMRLAAEAGLPVVATHPVQFLDEFEFQAHEARVCIAEGEILANPRRVRRFSK
EQYLLSSEEMARRFADVPSALANTVEIAKRCNLSLVLGKPRLPNFPTPDGVTLDDYLVQL
SEQGLEKRMEFLFPDEAERESKREQYYERLRWECKTIIQMGFPGYFLIVQDFINWGKNNG
VPVGPGRGSGAGSLVAYALGITDLDPIRYDLLFERFLNPERVSMPDFDIDFCQDNRERVI
DYVKEKYGRAAVSQIATFGTLGAKAVVRDAGRVLDMPYMFCDGLSKLIPFNPMDPWTLER
TLKDEPAFKDRYEQEEEVRSLVDLAKPLEGLTRNIGMHAGGVLIAPGKLTDFCPLYCQPG
QENSAVSQFDKDDVEAAGLVKFDFLGLRNLTILDWAVRYVRQFNAEKRDFDVMALALDDP
AAYKILCDANTTAVFQLESRGMKELLKKLRPNTFEDIIAMLALYRPGPLESGMVDDFVNR
KHGRAAVDYFHPDLEATLKSTYGVIVYQEQVMLISQIIGGYSLGGADLLRRAMGKKKPEE
MAKHRELFEQGAKEKGHDPDLAVKLFDLMEKFAGYGFNKSHSAAYALISYQTAWLKAYHP
TEFLAATMSSDMDDTDKVQIFCRDAQDNGVEVLPPDVNHSGYRFEPVADKHTEKGKPPRT
MRYGLGAVKGTGQGAVEDILRARKEGGPFLNLFDFCRRVSKQAVNRRTIEALIKAGAFDT
IEPNRAAMLASVPTAMEAAEQAARSANQASLFGDDSGDVVAGELAKVAPWDLHKKLTEEK
SALGYYYSGHLFDAWRDEVRRIVPMQLARVEPQRDLQWMCGVLASVRVMMTRRGKMVFAV
LDDGSAQVEISVFNELYEKHRNRLREDQLVIVQGKVSNDDYSGGMRIVAEQLYDLQLARE
ARAKSLRVKLNGTADAARLRQMLNPFRAEPENGIPGVPVDIVYTKNNFLCTVRLGEEWRV
RMADTLLANLNDWTKPDGVEVTY
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagccgtaacgaccccgaccccatttgttcacctgcgcgtccactccgagttt
tcggtcgtggacggcacggtgcgtattcccgacctcatcaagcgtgtggccaagctgggc
cagcccgccgtcgccctgaccgatctgtcgaacctgttcggactgatcaagttctacaag
ggcgcgcgcggcgcgggggtcaagcccattgccggctgcgacgtctggatctccaacgac
gaagatcccgccaagccatttcgcctgctgttgctggtgcgcaaccaccagggctacctg
aatctctgcgaactgctgtccaaggccttcctgacgaaccagggcaagggccgcgcggaa
attcgccgcgaatggctgcaagggcaggccggtctcatcgccttgtccggcggacgggcc
ggcgacgtcgggcaggcgctggaggccggcaatgccgtctcggcgctggccttggcccgc
cagtgggcgctgatgttccccggcagctactacatcgaattgcagcgtgccggcatggac
ggcgacgaaggctactgccaggccgccatgcggctggccgccgaagccggcctgccggtg
gtcgccacccatcccgtgcagttcctggatgaattcgaattccaggcccatgaggcccgt
gtctgcatcgccgaaggcgagatcctggccaacccgcgccgcgtgcgccggttctccaaa
gagcagtacctgctcagctccgaggaaatggcgcgccggttcgccgacgtgccgtcggcg
ctggccaatacggtcgaaatcgccaagcgctgcaacctgagcctggtgctgggcaagccg
cgcctgcccaatttccccacgccggacggcgtgacgctcgacgattacctggtccagctc
tccgagcagggcctggaaaagcgcatggagttcctgttcccggacgaagccgagcgcgag
tccaagcgcgagcagtattacgagcggctgcgctgggagtgcaagaccatcatccagatg
ggctttccaggctacttcctgatcgtgcaggacttcatcaactggggtaagaacaacggc
gtgccggttggaccgggccggggttccggcgccggttcgctggtggcctacgcgctgggc
atcaccgacctcgatcccatccgctatgacctgctgttcgagcgcttcctgaatcccgag
cgggtctccatgcccgacttcgatatcgacttctgccaggacaaccgcgaacgagtcatc
gactacgtcaaggaaaaatacggccgcgccgccgtcagccagatcgcgaccttcggcacg
ctgggcgccaaggccgtggtgcgcgacgcgggccgcgtgctggacatgccctacatgttc
tgcgatggcctgtccaagctgatcccgttcaacccgatggatccctggacgctggagcgc
acgctaaaggacgagcccgccttcaaggaccgctacgagcaggaagaagaagtccgctcg
ctggtcgatctggccaagccgctcgaaggcctgacccgcaacatcggcatgcacgcgggc
ggggtgctgattgcgcccggcaagctcaccgacttctgcccgctgtactgccagccgggg
caggagaacagcgcggtctcgcagttcgacaaggacgacgtggaggccgccggcctggtg
aagttcgacttcctggggctgcgcaacctgacgattctggactgggccgtgcgctacgtg
cgccagttcaacgccgaaaagcgcgacttcgacgtcatggcgctggccctggacgatccg
gcggcctacaagatcctgtgcgacgccaacaccaccgcggtgttccagcttgaatcgcgc
ggcatgaaagagctgctcaagaagctgcggcccaatacgttcgaagacatcatcgccatg
ctggccctgtatcgtccagggccgctggaatcgggcatggtggacgacttcgtgaaccgc
aagcacgggcgcgcggccgtcgattatttccacccggacctggaagccaccctgaagagc
acctacggggtcatcgtctaccaggaacaggtgatgctgatctcgcagatcatcgggggc
tactcgctgggcggcgccgacctgctgcgccgggccatgggcaagaaaaagcccgaggaa
atggccaagcaccgcgagctcttcgaacagggcgccaaggaaaagggccacgatcccgac
ctggcggtcaagctgttcgacctgatggagaagttcgccggctacggcttcaacaagtcg
cactcggccgcgtacgcgctgatctcctaccagaccgcctggctgaaggcctaccacccg
accgagtttctggccgccaccatgtcctccgacatggacgacaccgacaaggtccagatc
ttctgccgcgacgcgcaggacaacggcgtcgaggtgctgccgcccgacgtcaaccactcg
ggctaccggttcgagcccgtcgccgacaagcacaccgaaaaaggcaagccgccgcgcacc
atgcgttacggcctgggcgccgtcaagggcacggggcaaggcgcggtcgaagacatcctg
cgcgcgcgcaaagaaggcggcccgttcctgaacctgttcgacttctgccgccgcgtcagc
aagcaggccgtcaaccgccgcaccatcgaggcgctgatcaaggcgggcgcgttcgacacc
atcgagcccaaccgcgccgccatgctggcttcggtgcccaccgccatggaagcggccgag
caggccgcgcgcagcgccaaccaggcctcgctttttggcgacgacagcggcgacgtggtc
gctggcgaactggccaaggtcgcgccctgggatctgcacaagaagctgaccgaagaaaag
tccgcgttgggctattactacagcggccacctgttcgatgcgtggcgcgacgaagtgcgc
cgcatcgtgccgatgcagcttgcgcgtgtggagccccagcgcgacctgcaatggatgtgc
ggcgtgctggccagcgtgcgcgtcatgatgacccgccgcggcaagatggtctttgccgtg
ctggacgacggctcggcgcaagtcgagatctcggtcttcaacgaactctacgagaagcac
cgcaaccggctgcgcgaagaccagctcgtcatcgtgcagggcaaggtcagcaacgacgac
tactccggcggcatgcgcatcgtcgccgaacagctctacgacctgcaactggcgcgcgag
gcgcgcgccaagtccctgcgcgtcaagctcaacggcactgccgacgcggcccgcctgcgt
cagatgctcaatcccttccgcgccgaacccgagaatggcattcccggggtgccggtcgat
atcgtctacacgaagaacaatttcctgtgcacggtcaggctcggggaggaatggcgcgtg
cgcatggccgacacgctgctggccaacctgaacgactggaccaagcctgatggcgtggag
gtcacctactaa
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