Achromobacter sp. 77: H4P35_12950
Help
Entry
H4P35_12950 CDS
T08458
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
acho
Achromobacter sp. 77
Brite
KEGG Orthology (KO) [BR:
acho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acho03032
]
H4P35_12950
03400 DNA repair and recombination proteins [BR:
acho03400
]
H4P35_12950
Enzymes [BR:
acho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
H4P35_12950
DNA replication proteins [BR:
acho03032
]
Prokaryotic type
DNA Topoisomerases
H4P35_12950
DNA repair and recombination proteins [BR:
acho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
H4P35_12950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
NNH1
Motif
Other DBs
NCBI-ProteinID:
UDG78168
LinkDB
All DBs
Position
complement(2799716..2800768)
Genome browser
AA seq
350 aa
AA seq
DB search
MSTRTQKDPDPLPVEEASLTYVDDTQPGYTRVRVNAHTFHYLDEKGARITDEAQIQRINA
LAIPPAYENVWICPLADGHLQATARDARGRKQYRYHPGWTAVRDATKYKNLLSFGHALPR
IRRQVERDMKIPGLTQDKVVATLVRLLEITLIRVGGREYARANKSYGLTTLKRRHTTVAG
SRFRFRFQGKSGVAHDVTVTDRRVARIIKQCLDIPGQQLFQYLDADGDKRPVDSGAVNAY
LRHAGGGEYTAKHYRTWAGSVMAFAALQARPFEDERRAKQEAVDVIKAVSKRLANTPAVC
RACYVHPAIMEAYLTGTLPARTAAPAGPRGLSADERRLLAFLHEQDAGDA
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgagcacccgcacgcaaaaggacccggacccgttgcccgtcgaagaggcatcgctgacc
tatgtggacgacacgcagcccggctacacccgcgtgcgcgtcaacgcccatacgtttcac
tatctggacgagaaaggcgcgcgcatcaccgacgaggcgcagatccagcgcatcaatgcc
ctggccatcccgcccgcgtacgaaaacgtatggatctgcccgctggcggacgggcatctt
caggccacggcgcgcgatgcgcgcggccgcaagcaatatcgctatcaccccggctggacg
gcggtgcgcgacgccaccaaatacaagaatctgctgtccttcggccacgcattgccccgg
atccggcgtcaggtcgagcgcgacatgaagataccgggcctcacgcaggacaaggtggtc
gcgaccctggtccgcctgctggagatcaccctgatccgcgttggcgggcgcgaatatgcg
cgtgccaacaagtcctacggcctgacaacgctcaagcgccgtcacacgaccgtggccggc
agccgttttcggttcagattccagggcaagagcggcgtggcccacgacgtcacggtcacg
gaccgtcgcgtggcgcgcatcatcaagcaatgcctggacattccgggccagcagctgttt
cagtatctggatgccgacggcgacaagcgcccggttgattccggcgcggtcaatgcctac
ctgcgtcacgccggcggcggcgaatacaccgccaagcactatcgcacctgggcgggctcc
gtgatggcctttgccgcgctgcaggcgcgcccgttcgaagacgagcgccgcgccaagcag
gaggcggtggacgtcatcaaggccgtatcaaaacggctggcgaacacgcccgccgtgtgc
cgcgcgtgctacgtgcacccagccatcatggaggcctacctgactggtacgctgcccgcg
cgcacggccgcgccagcaggccctcgcgggctcagcgccgacgagcggcgcctgctcgcc
tttcttcatgagcaggacgccggcgatgcgtga
DBGET
integrated database retrieval system
