Achromobacter sp. 77: H4P35_19635
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Entry
H4P35_19635 CDS
T08458
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
acho
Achromobacter sp. 77
Pathway
acho03030
DNA replication
acho03430
Mismatch repair
acho03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H4P35_19635
03430 Mismatch repair
H4P35_19635
03440 Homologous recombination
H4P35_19635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acho03032
]
H4P35_19635
03400 DNA repair and recombination proteins [BR:
acho03400
]
H4P35_19635
Enzymes [BR:
acho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H4P35_19635
DNA replication proteins [BR:
acho03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H4P35_19635
DNA repair and recombination proteins [BR:
acho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H4P35_19635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
UDG74416
LinkDB
All DBs
Position
complement(4243518..4244138)
Genome browser
AA seq
206 aa
AA seq
DB search
MSFFFRRTPSSGASPARPSRPAARAQAAVTQALDALGGPFIVADLETTGLSTASCEILEF
AAVRVGEGGAVVNEYTQVVRTCGRVPSFISRLTGITQAEVDRDGIPVAQAFSSFLAFVED
LPVFFHNASFDRRFLSAAADQTGMPFSNATHCTLALARRAWPELTSHKLDILARHVGASQ
PTHRALADVRTTVAVALAASARLASV
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
gtgagctttttctttcggcgcacgccttcgagcggcgcatcaccggcacgcccctcccgg
ccggcggcccgagctcaagccgcggtcacgcaagcccttgacgcgttgggcggcccgttc
atcgtggccgaccttgaaacgaccggcctgtccaccgccagttgcgaaatccttgaattc
gcggcggtcagggtcggcgagggcggcgccgtggtgaacgagtacacgcaggtcgtgcgc
acgtgcgggcgcgtgccctccttcatttcgcgccttaccggcatcacgcaggccgaagtc
gatcgcgacggcataccggtcgcgcaggccttttcttcgttcctggcgtttgtcgaggac
ctgccggtgtttttccacaatgcctcgttcgatcggcgcttcctcagcgcggcggcagac
cagacggggatgcctttctcgaacgccacccactgcacgttggcgctggcgcgccgcgcg
tggcccgagctgacgtcgcacaaactcgacatccttgcgcggcacgtgggcgcctcgcag
cccactcacagggcgttggccgacgtgcgcacgacggttgcggttgcgcttgcggccagc
gctcgcctggcctcggtgtag
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