Achromobacter sp. 77: H4P35_20945
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Entry
H4P35_20945 CDS
T08458
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
acho
Achromobacter sp. 77
Pathway
acho03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
acho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H4P35_20945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acho03000
]
H4P35_20945
03400 DNA repair and recombination proteins [BR:
acho03400
]
H4P35_20945
Enzymes [BR:
acho01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
H4P35_20945
Transcription factors [BR:
acho03000
]
Prokaryotic type
Helix-turn-helix
AraC family
H4P35_20945
DNA repair and recombination proteins [BR:
acho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
H4P35_20945
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
UDG74654
LinkDB
All DBs
Position
4514941..4516386
Genome browser
AA seq
481 aa
AA seq
DB search
MNLNHDACYSAIQVRDARYDGRFFTAVKTTRIYCRPVCPARTPLSKNVTFFSTAAAAQEA
GFHPCLRCRPETAPELGPGHELPASVTRALQRIELGALDEAGVDVLAQRLGIGERQLRRQ
FRQHLGASPVAFAQTRRVLLAKQLIHETQLPMAEIAFAAGFGSIRRFNEVFLDLFGRAPG
ELRRSGKPEVPAGRDGEIKLLLRYRPPYDWDAMLAFLRLRAIPGVESVTGDTYARTISLD
GAQGTVSVRPGAGDALHVTVRFPRLQSLPAIIARLRRVFDLASDPTAIAAQFSTDPVMMA
LMQARPGLRVPGAWDGFELAMRAVLGQQITVAAAIRLAGKLVAAHGAPLTQPDGALTHVF
PEPATVAAAELASLGMPRSRAATLSAVAAAAVADPHLFDAAVDLEDAVRRLRTIRGVGEW
TAQYIALRQLREPDAFPHADIGLIRALEKLESRPYTPAQLLARSEAWRPWRAYAAQHLWT
A
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgaaccacgatgcctgctacagcgccatccaggtgcgcgacgcccgctacgac
ggccgcttcttcacggccgtgaaaaccacgcgcatctactgccggccggtctgtccggcg
cgcacgcccctgtccaagaacgtcacgttcttctcgaccgccgcggccgcgcaagaggcg
ggtttccacccctgcctgcgctgccgtccggaaacggcgcccgaattgggccctggccac
gaactgccggccagcgtgacgcgcgcgctgcagcgcatcgaactgggtgcgctggacgag
gccggcgtcgacgtgctggcgcagcgcctgggcatcggcgagcggcagttgcgccgccaa
ttccgccagcatctgggcgcctcgcccgtcgcattcgcacagacgcgccgcgtgctgctg
gccaagcagctcatccacgaaacgcaacttcccatggccgagatcgcgttcgccgccggc
ttcggcagcatccgccgcttcaacgaggtgttcctggacctgttcggccgcgcacccggc
gaattgcggcgttcaggcaagccggaagtgcccgcgggtcgggacggagaaatcaagctg
ttgctgcgttatcgcccgccctacgactgggacgccatgctggccttcctgcggctgcgc
gcgatccccggggtggaatccgtgaccggcgacacctatgcgcgcaccatcagcctggac
ggcgcgcagggcacggtctcggtccggccgggcgccggcgacgcgctgcacgtgacggtg
cgctttccccgcctgcaatcgctgcccgcgatcattgcgcgcctgcgccgcgtctttgat
ctggccagcgaccccacggccattgccgcgcagttttccaccgatccggtcatgatggcg
ttgatgcaggcgcggccgggtttgcgcgtgccgggcgcgtgggacgggtttgaactcgcc
atgcgcgcggtgctgggccaacagatcacggtggccgcggccatccggctggccggcaag
ctggtggcggcgcacggcgcgccgctgacgcaaccggacggtgcgctgacccatgtgttc
cccgagcccgcaacggtggccgccgccgagctggcatcgctgggcatgccgcgcagccgc
gcggcgacgttgtcggcggtggccgcagccgccgtcgcggacccgcatctctttgacgcc
gccgtcgatcttgaagacgcggtgcggcggctgcgtacgatacgcggcgtcggggaatgg
acggcgcagtacatcgcgctacggcaactgcgcgaaccggatgcgtttccgcatgcggac
atcggcctgatccgcgcactggaaaagctggaatcccggccctacacgcccgcacagctg
ctggcgcggtccgaggcctggcggccgtggcgcgcctatgcggcgcagcacctttggacg
gcctga
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