Achromobacter sp. 77: H4P35_25025
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Entry
H4P35_25025 CDS
T08458
Name
(GenBank) polysaccharide lyase family 1 protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
acho
Achromobacter sp. 77
Pathway
acho00040
Pentose and glucuronate interconversions
acho01100
Metabolic pathways
acho02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
acho00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
H4P35_25025
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
H4P35_25025
Enzymes [BR:
acho01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
H4P35_25025
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
UDG78592
LinkDB
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Position
complement(5437733..5438962)
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AA seq
409 aa
AA seq
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MRLQKTMMIGLLALAGLHGGTAAAAEPCKAPDEHCPFVSALLAQREGYGAKATGGLGGKF
IEVTSDQDAGPGTLRAALAQARKGPTWIRFASDMTIVLKSQLRVPSNTTIDGRGKRVALI
DDGLGVYGAKNVILTHLTIDGRLTRLTQAVNVANDSRDVWVDHMDLSRMSDRLLNVKNGS
TDVTISWTKFHNSNKVMLLNNITSKNLFQNYERDSIARVTLHHNYFFNTVQRNPRAQFGT
FHLFNNLLENWDFYGMSFSLEAKALVEGNIFNNDAQRKCVEPEFFPTVEGINVNYCRYIP
IAPARSALENGDSDRGAYERRKEDHGYTRDFKAFLRLKDNLYLGDAKPVLQDYRPESAPT
PPYCYGYEKATPELAEKIRKFAGNTSGDTPLPASRTGAGCQAESHRPGS
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgcgacttcaaaagacgatgatgatcgggctgctggcgctggccggcctgcatggcggc
actgcggcagcagccgagccgtgcaaggcgccggacgagcactgtccgttcgtctcggcg
ttgctggcgcagcgcgaagggtatggggccaaggcgacgggcggcctgggcggcaagttc
attgaagtgacgtccgaccaggacgccggccccggcacgctgcgggcagcgctggcgcag
gcccgcaaggggccgacgtggatacgctttgcctcggacatgaccattgtcctgaagtcg
cagttgcgggttccgtccaacacgaccatcgatggccgcggcaagcgggtggccctgatc
gacgatggcctgggcgtgtatggcgcgaagaacgtcatcctgacgcacctgaccatcgac
gggcggctcacccgcctcacgcaggccgtgaacgtggccaacgacagccgcgacgtgtgg
gttgaccacatggatctgtcgcggatgtcggatcgcctgttgaacgtgaagaacggctcg
accgacgtgacgatctcgtggaccaagttccacaattcaaacaaggtgatgctgctgaac
aacatcacgtccaagaacctgttccagaactacgagcgcgattcgattgcacgtgtaacg
ttgcatcacaactatttcttcaacaccgtgcagcgcaatccgcgcgcgcaattcggcacc
ttccacctgttcaacaacctgctagagaactgggacttctacggcatgagtttcagcctg
gaggccaaggcgctggtggaaggcaacatcttcaacaacgatgcccagcgcaaatgcgtg
gaacccgagttctttcccaccgtggaaggcatcaatgtcaattattgtcgctatatcccg
attgcgccggcgcgcagcgcattggaaaatggcgactccgatcgcggggcctatgaaagg
cgcaaggaggatcacgggtacactcgcgacttcaaggcgtttctgcgtctgaaagacaac
ctgtacctgggcgatgcgaagccggtgctgcaggattaccgccccgagtcggcgcccacg
ccgccgtattgttacggctacgagaaggcgacgcccgagctggccgagaagatccgcaag
tttgcgggcaatacatcgggcgatacgcccctgccggcctcacgcacgggtgcgggttgc
caggctgaaagtcatcggccagggtcttga
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