Aciduricibacillus chroicocephali: QR721_02565
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Entry
QR721_02565 CDS
T10148
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
achp Aciduricibacillus chroicocephali
Pathway
achp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
achp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QR721_02565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
achp03019
]
QR721_02565
03009 Ribosome biogenesis [BR:
achp03009
]
QR721_02565
Enzymes [BR:
achp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QR721_02565
Messenger RNA biogenesis [BR:
achp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QR721_02565
Ribosome biogenesis [BR:
achp03009
]
Prokaryotic type
rRNA helicases
QR721_02565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
AAA_22
AAA_30
AAA_19
SUa-2TM
CobA_CobO_BtuR
Motif
Other DBs
NCBI-ProteinID:
WLV25145
LinkDB
All DBs
Position
485346..486827
Genome browser
AA seq
493 aa
AA seq
DB search
MAKFNELGISDSVMQALEKMGFEEATPIQTETIPYALEGNDVIGQAQTGTGKTAAFGIPM
IEKLEAGFRKIQAIVVAPTRELAIQVAEELNRLGRFKGIRALSVYGGANMDRQIRSLKDG
PQIVVATPGRLLDHLRRKTIRTDNVKFAVLDEADEMLNMGFIDDIRDILKAIPEERQTLL
FSATMPKEIREIATTLMNNPKEVKVKAKEVTVENIDQSFIEIPEKFKFDTLTNHIDINSP
DLAIIFSRTKRRVDEITEGLQARGFRAEGIHGDLTQGKRMSVLNKFKSGRVDVLVATDVA
ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGRTGEAISFVTPREIPHLRLIEKVTK
SKMKRLAPPTNKDAQKGQQQVTISKLERIIAEQDLTAYHEVANELLEEHDSLTVLSAALK
MLTKERKDIPVRISSIQPISVKGPRNNDRRRSGGGRQGGYSGGGGKRFYGQRSGGGQGSR
NRKGGYQSRRNND
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
ttggctaaatttaatgaacttggtatttcggattccgtcatgcaagcgttggaaaaaatg
ggctttgaagaagcaacaccaatccagacggaaacaattccctatgcacttgaaggtaac
gatgtaattggacaagcacagacaggtactggtaagactgcagcattcggtatcccgatg
attgaaaaactcgaggccggtttccgcaaaatccaggcaattgttgttgcccctacacgt
gaacttgcaattcaggttgcagaagagcttaacagacttggccgcttcaaaggtatacgt
gccctttctgtttatggcggtgcgaacatggaccgtcagattcgttctctaaaagacggc
ccacagatcgtagttgccacacctggacgacttctcgatcacttgcgtcgtaaaacgatt
cgtactgacaatgttaaatttgcagtccttgatgaagcagatgaaatgctgaacatgggc
ttcattgatgatatccgtgatatcttgaaggcgattcctgaagagcgccaaactttgctc
ttctcagcaacaatgcctaaagaaattcgcgaaattgcaactactttgatgaacaacccg
aaagaagtcaaagtaaaagcgaaagaagttacagttgagaacatcgaccagtccttcatt
gaaatccctgagaagttcaagttcgatacgcttacgaaccacattgatattaattcacca
gatctagcaattatcttcagtcgtacgaagcgacgtgttgatgaaattactgaaggattg
caagcacgcggtttccgtgctgaaggtatccacggtgacttgacacagggcaagcgtatg
agcgttcttaacaagttcaaaagcggccgtgtggatgtacttgttgcgacagacgttgct
gcacgcggtcttgatatctctggtgttacacatgtatacaactttgatattccacaggat
ccagaaagctatgtacaccgcatcggacgtacgggccgtgctggacgtacaggtgaagcg
atttccttcgttacaccacgtgaaatcccgcatcttcgtctaatcgaaaaggtgacgaag
agcaagatgaagcgtcttgctccaccaacgaacaaagatgcacaaaaaggacaacagcaa
gtgacaatttctaaattggaaagaatcattgctgagcaggatcttactgcataccatgaa
gttgctaatgaattgcttgaagagcatgattctttgacagttctttctgcagcacttaag
atgctgacaaaagagcgcaaagatattccagtccgtatttcttccattcagccaattagt
gtcaaaggtccacgtaataatgaccgcagacgcagtggcggcggacgccaaggcggctat
agtggtggtggaggtaaacgcttctacggccagcgcagtggtggcggtcaaggttcccgc
aaccgtaaaggcggataccagagccgacgtaataacgactaa
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