Aciduricibacillus chroicocephali: QR721_07960
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Entry
QR721_07960 CDS
T10148
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
achp Aciduricibacillus chroicocephali
Pathway
achp02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
achp00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
QR721_07960 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
achp03021
]
QR721_07960 (rpoD)
Transcription machinery [BR:
achp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QR721_07960 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
Pox_G7
Exonuc_VII_L
Glyoxalase
Motif
Other DBs
NCBI-ProteinID:
WLV23584
UniProt:
A0ABY9KSQ6
LinkDB
All DBs
Position
complement(1508121..1509239)
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AA seq
372 aa
AA seq
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MAKKATNTPEQEPELTLEQAKEKLLEMGKKRGSLAYEEVADRLANFAIESDQMDEFYDFL
SEQGVEIIGESDEDPNMQQISKEEEFDLKDLSVPLGIKINDPVRMYLKEIGRVDLLSAQD
EIALATKIEEGDEEAKRRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVEKFD
YRKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGREPTP
EEIGKEMELSPEKVRDILKIAQEPVSLETPIGEEDDSHLGDFIEDQEAVSPSDHAAYELL
KEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH
PSRSKRLKDFLD
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaaaagcaacgaatactccagagcaggaaccagaattgactttggaacaagcg
aaagagaaactgttggaaatgggtaagaagcgtgggtctttggcatatgaagaggttgca
gaccgccttgccaatttcgccattgaatccgaccagatggatgaattctatgattttctg
agtgagcaaggtgtggaaatcataggagaatctgatgaagatccaaacatgcagcaaatc
tccaaagaagaggaattcgaccttaaggacttaagtgttccgctaggtatcaaaataaat
gaccctgttcgtatgtaccttaaggaaattggtcgtgtagacttgctttctgcacaggat
gagatcgcccttgcgactaagattgaagagggggatgaggaagcaaagcgcagacttgct
gaagcgaacttgcgccttgttgtaagtattgcgaagagatatgtaggccgcggtatgcta
ttccttgatctgattcaggaagggaatatgggactgattaaggctgttgagaagtttgac
tatcgcaaaggattcaagtttagtacttatgcaacttggtggatccgtcaggcgattaca
cgagcaattgccgaccaggctagaacaatccgtataccggtacacatggtcgagacgatc
aataaacttattcgtgttcagcgtcaacttcttcaagatcttggccgcgaaccgactcct
gaagaaataggtaaagaaatggaactttctccggaaaaagtgcgtgatattcttaaaatc
gcacaggagcctgtatcccttgaaacaccgattggtgaagaggatgactcacatcttggt
gacttcattgaagatcaggaagcagtatctccttcagaccatgcagcatatgagttgcta
aaggaacagcttgaagatgtgctcgatacgttgactgacagagaggaaaacgtactcaga
cttcgctttggccttgatgatggccggactcgcacgcttgaggaagtcggaaaagtgttc
ggtgtaacacgtgagcgtatccgtcagattgaagcaaaagcccttcgcaaactgcgccac
cctagccgcagtaagcgattgaaggatttcctcgattga
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