KEGG   Achromobacter sp. AONIH1: C2U31_01390
Entry
C2U31_01390       CDS       T05288                                 
Symbol
cas8c
Name
(GenBank) type I-C CRISPR-associated protein Cas8c/Csd1
  KO
K19117  CRISPR-associated protein Csd1
Organism
achr  Achromobacter sp. AONIH1
Brite
KEGG Orthology (KO) [BR:achr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:achr02048]
    C2U31_01390 (cas8c)
Prokaryotic defense system [BR:achr02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    C2U31_01390 (cas8c)
SSDB
Motif
Pfam: Cas_Csd1
Other DBs
NCBI-ProteinID: AUT44737
LinkDB
Position
complement(311709..313526)
AA seq 605 aa
MILQALVAYYQRLLERREEGLAPFGYSPEKISYEILLAADGRVVQVNDIRDTTGKKPQPR
LMNVPQPEKRTVGVKSNFLWDKTSYVLGVSATSKRADKEHGAFKALHREHLAGAQDAGLK
ALLGFLDAWTPQQFEAPHFNQDMLDANMVFRLDGEQTYLHERPAAQALRARLLVSDDGGG
EESVATCLVSGESQPVARLHPVIKGVSGAQSSGASIVSFNQEAFTSYGKSQGDNAPVSEQ
AAFAYTTVLNHLLRRSEHNRQRLQIGDTSIVFWAEAADAQEAEQAELLLADLLGDRPTDE
QETARIRTELEKVQKGRPLGDIDPRLQEDTRMYVLGLAPNASRISIRFWEVGTLGLFARR
LADHAADFALDPQPWKTAPSAYRVVLATAPHREGSAPKMDDAMSNLVGELMRAVLTGRPY
PRSLLANVLMRMRSDGHLSGLRVGICKGILARERRLGINSDKEEIPVSLDKESTSPAYRL
GRLFAVLESAQRQALGGQVNATIRDRYYGAASATPASVFPMLLRNAQNHLGRLRKDRPGA
AVGLEKDIREIVDGLTDSFPRSLRIEDQGRFAIGYYHQSQSRFNKMDRSDDSTDSTEDTS
EEASA
NT seq 1818 nt   +upstreamnt  +downstreamnt
atgatcttgcaggcgctcgttgcctactaccagcggctattggaacgtcgtgaagaaggc
ttggctccctttggctatagccccgagaagatcagctacgaaatcctgttggccgctgat
ggccgtgtggtgcaggtcaatgacatccgcgataccacgggaaagaagccacagccgcgc
ctgatgaatgtgcctcagcccgagaagaggacggttggcgtcaagtctaactttctctgg
gacaagaccagctatgtgctgggcgtgagcgccaccagcaagcgcgcagacaaggagcac
ggagccttcaaggccttgcaccgcgagcatctggccggcgcgcaggatgcgggcttgaaa
gcgctgctgggctttctcgatgcctggacaccgcagcaattcgaagcgccacatttcaac
caggatatgctcgatgccaacatggtgttccgccttgatggcgaacagacctatctgcac
gagcgccccgccgcgcaggcgttgcgcgctcggctgctggtcagcgacgatggcggcggc
gaggagtcggtggcgacctgcctagtgagtggtgaaagccagcccgtggcgcgtctgcat
cctgtcatcaagggagtcagcggcgcgcagagttccggcgcttccattgtctccttcaat
caggaggccttcacctcttacggcaagagtcagggtgacaacgcgcctgtgtccgagcag
gcggcatttgcgtacaccaccgtgctcaatcatctgctgcggcgcagtgagcacaaccgc
cagcgccttcagataggcgacaccagcatcgtcttctgggccgaagccgctgatgcgcag
gaggccgagcaggccgaactgctgttggccgatctgctcggcgaccgtcccacggacgag
caagaaaccgcgcgtattcggaccgagctggaaaaagttcaaaagggccgaccgctgggt
gacatcgacccccggcttcaggaagacacacgcatgtacgtgctgggtcttgcgcccaat
gcctcgcgcatctccatccgcttctgggaggtcggcacgcttggtctgttcgcgcgccgc
ctggctgaccatgcggccgatttcgcgctggacccgcaaccgtggaagacggcgccttcg
gcctaccgcgtggtgctggccacggcgccgcaccgcgagggcagcgcacccaagatggac
gacgccatgagcaatctcgtgggtgagctgatgcgcgcggtgcttaccggccgaccctat
ccacgcagcctgttggccaacgtcctgatgcgcatgcgcagcgatggccatctatcgggg
ttgcgcgtgggtatttgcaaaggcattctggcgcgcgagcgccgcctgggaatcaacagt
gacaaggaggagatccccgtgagtctagacaaggaatccaccagcccggcctaccggctg
ggccgcctgttcgccgtgctggaaagcgcgcaacgtcaggccttgggcgggcaggtcaac
gcgaccatccgcgaccgctactacggcgcggcttcggccacacccgcctcggtttttccc
atgctgctgcgcaatgcgcaaaatcatctggggcgcttgcgcaaggaccggccgggcgcc
gccgttgggctggaaaaggacatccgcgagatcgtcgatggcctcaccgacagcttcccg
cgcagcctgcgcatcgaagaccagggccgtttcgccatcggctactaccaccagtcgcaa
agccgtttcaacaagatggaccgcagcgacgacagcaccgattccaccgaagacacctcc
gaggaagcctccgcatga

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