Achromobacter sp. AONIH1: C2U31_01850
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Entry
C2U31_01850 CDS
T05288
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
achr
Achromobacter sp. AONIH1
Brite
KEGG Orthology (KO) [BR:
achr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
achr03016
]
C2U31_01850
Enzymes [BR:
achr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
C2U31_01850
Transfer RNA biogenesis [BR:
achr03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
C2U31_01850
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AUT44816
UniProt:
A0A2I8DBU8
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All DBs
Position
407144..407689
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AA seq
181 aa
AA seq
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MSTMRLFYALWPAPTLATSLASWAEQARPATGGRIMRTETLHLTLAFLGNIDMETAEELI
DATPVHRLEPGALTLDQYGVFNRQRILWAGPSRTPDDLQAIHDGLWLWLSGYGVQAPAQP
FRPHVTLLRDIDPAKAPEAAPESLTWHYDRMVLVASESRQDGSRYRVVAQSRPQPHPQPA
D
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccatgcgcctcttctacgccctctggcccgcccccaccctggccacttccctg
gccagctgggccgagcaagcccgcccagccaccggcggcagaatcatgcgcaccgagacc
ctgcacctgacgctcgccttccttggcaacatcgacatggaaaccgccgaggaactgatc
gacgccacgcccgtgcatcgccttgaacccggcgccctcacgctcgaccagtacggcgtc
ttcaaccgccagcgcatcctctgggccggcccctcccgcacccccgacgacctgcaagcc
atccacgatggcctgtggctctggctgtccggctacggcgtgcaagcgcccgcgcaaccg
ttccgcccccacgtcaccctgctgcgcgacatcgaccccgccaaggccccggaagcagcc
cccgaatcgctgacctggcactacgaccgcatggtgctcgtcgcctccgaatcgcggcag
gacggcagccgctaccgcgtcgtcgcccaatcccgcccgcaaccccacccccagcccgcc
gactga
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