Achromobacter sp. AONIH1: C2U31_07885
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Entry
C2U31_07885 CDS
T05288
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
achr
Achromobacter sp. AONIH1
Brite
KEGG Orthology (KO) [BR:
achr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
achr03016
]
C2U31_07885
Enzymes [BR:
achr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
C2U31_07885
Transfer RNA biogenesis [BR:
achr03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
C2U31_07885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
DUF7691
RNase_P-MRP_p29
Motif
Other DBs
NCBI-ProteinID:
AUT45910
UniProt:
A0A2I8DF67
LinkDB
All DBs
Position
complement(1711842..1713752)
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AA seq
636 aa
AA seq
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MYVFYEDDGSFKAGNILSETDASLQVESESGKRSKIKRANTLFTFAAPEPAALMSQAAAA
AEALDLQFLWECAPQEEFDSPALAADYFGHAPTPVEQAALLMRLHGAPAYFHRRGKGRYR
PAPPDILAAALAALEKKQRQAEQQQEWVDEMAAGRLPEEIAQAAESLLVRPDKNSQQWKA
LDAACAKLGKTPDRLLLDLGAWPHALALHKRRFLAVNFPRGLAFPDLPLPAIERELPLAD
AEIYSVDDITTTEIDDALSVTTLPDGKLRVGVHVAAPGLLVTRDSEFDKLARARLSTVYM
PGDKIPMQPDSIISAFSLDAGRAVPALSLYVTADPETGEVLESETRLERVMVRENLRHNM
LDAQVTEASLADPAAELPYGHWLRPLWKLAQALSAQRENVRGKPENNSRVEYSFYLDGNP
DDPDTPVRLVPRQRNAPLDRMVAEYMILANNLWGGLLHQHGVPGIYRSQQAGRVRMSTQA
LPHEAIGVPQYAWSTSPLRRYVDLVNQWQLIAAVEHGVSARLVAPFKPRDADLFAIIGAF
DAQYATWAEFQSAMERYWCLRWLKQHNITRTVAHVLRDDLVRFGNAPLVTRVGGMPELER
GTAVEIDILGMDELSLELDCRYLGQLAPAAQAEPQA
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtgttttacgaagacgacggcagcttcaaggccggcaacatcctgtccgaaacc
gacgccagcctgcaggtggaatcggaatccggcaagcgcagcaagatcaagcgcgccaac
acgctgttcacattcgccgcgccggaacccgccgcgctgatgagccaggcggcggccgcc
gccgaggcgctggacctgcagttcctgtgggaatgcgcgccccaggaggaattcgattcc
cccgccctggccgccgattatttcggccatgcccccacgccggtcgaacaggccgcgctg
ctgatgcgactgcacggcgcgcccgcctatttccaccgccgcggcaagggccgctatcgc
cccgccccgcccgacatcctggccgccgcgctggccgcgctggagaaaaagcagcgtcag
gccgagcagcagcaggaatgggtcgatgaaatggccgccggccgcctgcccgaggaaatc
gcccaggcggcggaatcgctgctggtgcgccccgacaagaattcccagcagtggaaggcg
ctggacgcggcctgcgccaagctgggcaagacgcccgaccgcctgctgctggacctgggc
gcctggccgcacgcgctggcgctgcacaagcgccgcttcctggcggtgaacttcccgcgc
gggctggccttccccgacctgccgttgcccgccatcgagcgcgagctgccgctggcggac
gccgagatctattcggtggacgacatcaccaccaccgaaatcgacgacgcgctctcggtc
accacgctgcccgacggcaagctgcgcgtcggcgtgcacgtggctgcgccgggcctcctg
gtcacgcgcgacagcgagttcgacaagctggcgcgcgcgcgcctgtccacggtctacatg
ccgggcgacaagatccccatgcagccggacagcatcatcagcgccttctcgctggacgcc
gggcgcgcggtgccggccctgtcgctgtacgtgacggccgaccccgagaccggcgaggtc
ctcgaatcggaaacccgcctcgaacgcgtgatggtgcgcgagaacctgcgccacaacatg
ctggacgcgcaggtcaccgaagccagcctggccgatcccgccgccgaactgccttatgga
cattggctgcgcccgctctggaagctggcgcaggcgctgtcggcgcagcgcgagaacgtg
cgcggcaagcccgaaaacaactcgcgcgtcgaatacagcttctacctggacggcaacccc
gacgacccggacaccccggtgcggctggtgccgcgccagcgcaacgcgccgctggaccgc
atggtggccgagtacatgatcctggccaacaacctctggggcggactgctgcaccagcac
ggcgtgcccggcatctaccgttcccagcaggccggccgcgtgcgcatgagcacgcaggcg
ctgccgcatgaggccatcggcgtgcctcagtacgcctggagcacgtcaccgctgcgccgc
tacgtggacctggtcaaccagtggcagctgatcgcggcggtcgagcacggcgtgtcggcg
cgcctggtcgcgcccttcaagccgcgcgacgccgacctgttcgccatcatcggcgccttc
gacgcgcaatacgcgacctgggccgaattccagagcgcgatggagcgctactggtgcctg
cgctggctcaagcagcacaacatcacccgcaccgtggcccatgtgctgcgcgacgatctg
gtgcgcttcggcaacgcgccgctggtcacccgcgtgggcggcatgcccgagctggaacgc
ggcaccgccgtggagatcgacatcctcggcatggacgagctctcgctcgaactggactgc
cgctatctcggccagctggcgcccgccgcccaggcggaacctcaagcctga
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