Achromobacter sp. AONIH1: C2U31_09730
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Entry
C2U31_09730 CDS
T05288
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
achr
Achromobacter sp. AONIH1
Pathway
achr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
achr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C2U31_09730 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
achr03019
]
C2U31_09730 (recQ)
03400 DNA repair and recombination proteins [BR:
achr03400
]
C2U31_09730 (recQ)
Enzymes [BR:
achr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C2U31_09730 (recQ)
Messenger RNA biogenesis [BR:
achr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C2U31_09730 (recQ)
DNA repair and recombination proteins [BR:
achr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C2U31_09730 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
AUT46239
UniProt:
A0A2I8DGA0
LinkDB
All DBs
Position
complement(2144312..2146141)
Genome browser
AA seq
609 aa
AA seq
DB search
MSDARALEILQRVFGYESFRGDQQAIVDQVIGGGDALVLMPTGGGKSLCYQIPSLVREGT
GIVVSPLIALMQDQVDALTELGVRAAFLNSTQEWQVARDVERAFLAGELDLLYVAPERLL
TDRCLQLLERGRIALFAIDEAHCVSQWGHDFRPEYLGLSMLHERWPDVPRIALTATATAA
TRSEIAQRLSLDEARHFVSSFDRPNIRYRIVEKNEVRKQLLDMIQNEHEGESGVVYCLSR
ARVEETAEFLCNQGIDAMPYHAGLSAQVRATNQSRFLREDGVVMVATIAFGMGIDKPDVR
FVAHIDLPKSVEGYYQETGRAGRDGLPATAWLAYGLQDVVQQRRMIDESPGDEAYRRRLG
QQLDAMLGLCETVECRRVRLLAYFGQHISACGNCDVCLDPPQAWDGTVAAQKVLSAVYRL
WKERGQRYGAGHIIDILRGKSTERTKQHGHETLSVFGVGADLSDTAWRGVLRQLLAQGLL
TVDNEGYGTLALTEGSRAVLKGEHQLMLRRESEKKGRASKTGSGRAKAAAVDLPPELQPL
FEALRAWRGEVAKSHGVPAYVIFHDATLREIALAQPETLDALSHISGVGARKLEAYGEEI
LQRVARPIV
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgcgcgcgcccttgaaatcctgcagcgcgtcttcggttacgaatccttccgc
ggcgaccagcaagccatcgtcgaccaggtgatcggcggcggcgacgcgctcgtgctcatg
cccaccggcggcggcaagtcgctgtgctaccagatcccctcgctggtgcgcgaaggcacc
ggcatcgtcgtatcgccgctgatcgcgctgatgcaggatcaggtcgacgcgctgaccgaa
ctcggcgtgcgcgccgcgttcctgaactcgacccaggaatggcaggtcgcccgcgacgtg
gaacgcgccttcctggcgggcgagctggacctgctgtacgtcgcgccggaacgcctcttg
accgaccgctgcctgcagctgctggaacgcggccgcatcgcgctgttcgccatcgacgag
gcgcactgcgtatcccaatggggccatgacttccggccggaatacctgggcctgtccatg
ctgcacgagcgctggcccgatgtgccgcgcatcgcgctgacggccaccgccaccgcggcc
acccgaagcgaaatcgcgcagcgcctgtcgctggacgaggcgcgccatttcgtctccagc
ttcgaccgccccaacatccgctaccgcatcgtcgagaagaacgaggtgcgcaagcagctg
ctggacatgatccagaacgaacacgaaggcgaatcgggcgtggtctattgcctgtcgcgc
gcccgggtcgaggaaaccgccgaattcctgtgcaaccagggcatcgacgccatgccctac
cacgccggcctgagcgcccaggtgcgcgccaccaaccagtcgcgctttctgcgcgaggac
ggcgtggtcatggtggccaccatcgccttcggcatgggcatcgacaagcccgacgtgcgc
ttcgtggcccacatcgacctgcccaagtcggtcgaaggctactaccaggaaaccggccgc
gccggccgcgacggcctgcccgccaccgcctggttggcctacggcctgcaggacgtggtg
cagcagcgccgcatgatcgacgaatcgcctggcgatgaagcctatcgccggcgcctgggc
cagcagctcgacgccatgctgggcctgtgcgagacggtcgaatgccgccgcgtgcggctg
ctggcctacttcggccagcacatcagcgcctgcggcaactgcgacgtctgcctggacccg
ccgcaggcctgggacggcacggtggcggcgcagaaagtgctgtcggccgtgtaccgtcta
tggaaggaacgcggccagcgctacggcgccggccacatcatcgatatcctgcgcggcaag
tccaccgagcgcaccaagcagcacggccacgagacgctgagcgtcttcggcgtcggcgcc
gacctgagcgacaccgcctggcgcggcgtgctgcgccaactgctggcgcagggcctgctg
accgtggacaacgaggggtacggcacgctggcgctgaccgaaggcagccgcgccgtgctc
aagggcgagcaccagctcatgctacgtcgcgaatccgaaaagaagggccgcgcgagcaag
accggcagcggacgcgccaaggccgccgccgtggacctgccgccggaactgcaaccgctg
ttcgaggcgctgcgcgcctggcgcggcgaagtggccaagagccacggcgtgccggcctac
gtcatcttccacgacgccacgctgcgcgagatcgcgctggcccagcccgagacgctggac
gcgctcagccacatcagcggcgtgggcgcgcgcaagctcgaagcctacggcgaggaaatc
ctgcagcgggtggctcggcccatcgtctga
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