Achromobacter sp. AONIH1: C2U31_24100
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Entry
C2U31_24100 CDS
T05288
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
achr
Achromobacter sp. AONIH1
Pathway
achr03420
Nucleotide excision repair
achr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
achr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C2U31_24100
03430 Mismatch repair
C2U31_24100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
achr03400
]
C2U31_24100
Enzymes [BR:
achr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C2U31_24100
DNA repair and recombination proteins [BR:
achr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C2U31_24100
MMR (mismatch excision repair)
Other MMR factors
C2U31_24100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AUT48803
UniProt:
A0A2I8DN41
LinkDB
All DBs
Position
complement(5258357..5260648)
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AA seq
763 aa
AA seq
DB search
MMLEKLNPEQRAAVTLEPQHALVLAGAGSGKTRVLTTRMAWLIQTGQASPFGLLAVTFTN
KAAREMLARMSSILPIDTRGLWIGTFHGLCNRMLRAHHRDAGLPQSFQILDVTDQLAAIK
RLMKANGVDDEKYPPRDVQRFINGAKEEGLRPDGVEAYDSHRRRLIEIYQLYEAQCQREG
VVDFAELLLRAYELLSRNAPVREHYQRRFRHILVDEFQDTNTLQYKWLRLLAGGGAAIFA
VGDDDQSIYAFRGANVGNMADFERDYARGTVIRLEQNYRSYGHILDSANALIGHNSGRLG
KNLWTEQGEGEPVRVIEQPSDGMEAQWVVDEIRSLIHEGSLRREIAVLYRSNAQSRVLEH
AIFSAGIPYKVYGGLRFFERQEIKHALAYLRLMANPQDDTSLMRVVNFPTRGIGARTLET
LADAARTHDISLYSAVAMVGGKGGSNLVQFAQLINRLIEETRDLPLPEMVEHMLEASGLN
AHYKAEREGAERLENLNELITAAAVFASEENYDGMPAGVVPQTDASSTLMPGVVDAPIVA
PDGMTPLAAFLSHAALEAGDNQAQQGQDAVQLMTVHAAKGLEFDAVFITGLEEGLFPHEN
SILEQSGLEEERRLMYVAITRARQRLYITLAQSRMLHGQTRYAMRSRFLEEIPEKHLKWL
TPKAGLAQAGASQASWGGSRTDAFGRKPTNTIAPRQPRGVATGVTVGDKQYRVGQGVHHA
RFGDGTIIGLSGSGQDAQAEIQFRDVGAKTLALGIAKLDIVQG
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgatgctagagaagctcaaccccgaacaacgcgccgcagtaacgttagaaccgcagcac
gccctggtcctggccggggcgggcagcggcaagacccgggtgctcaccacccgcatggcc
tggctgattcaaaccggccaggcttcgccttttgggctgctggctgtcacgttcaccaat
aaggccgcccgcgagatgctggcgcggatgtcgtccatcctgccgatcgacacgcgcggt
ctctggatcggcaccttccacgggctgtgcaatcgcatgctgcgggcgcatcaccgcgat
gccggcctgccgcaaagcttccagatcctcgatgtcaccgaccagctcgccgccatcaag
cggctgatgaaggccaatggcgtcgacgacgagaagtacccgccgcgcgacgtgcagcgc
ttcatcaatggcgccaaggaagaagggctgcgcccggacggcgtcgaagcctacgacagc
caccgccgccgcctgatcgagatctaccagctgtacgaggcccagtgccagcgcgagggc
gtggtcgatttcgccgagctgctgctgcgcgcctatgaactgctgtcgcgcaacgcgccg
gtgcgcgagcactaccagcggcgtttccgccacatcctggtcgatgagttccaggacacc
aacacgctgcagtacaagtggctgcgtctgctggccgggggcggcgcggcgatcttcgcc
gtgggtgatgacgaccagtccatttacgcgttccgtggcgccaacgtcggcaacatggcc
gacttcgagcgcgattacgcgcgtggcacggtgatccggctggagcagaactatcgttcc
tatggccacatcctggattcggccaacgcgctgatcggccacaacagcggccgcctgggc
aagaacctctggaccgagcagggcgaaggcgagcccgtgcgcgtcatcgagcagccgtcg
gacggcatggaagcccagtgggtggtggacgagatccgttcgctgatccacgaaggcagc
ctgcgccgcgagatcgccgtgctctaccgcagcaacgcgcagtcgcgcgtgctggaacac
gccatcttttccgccggcattccttacaaggtctatggcggcctgcgcttcttcgagcgc
caggaaatcaagcacgcgctggcctatctgcgcctgatggccaacccgcaggacgacacg
tcgttgatgcgggtggtgaacttccccacgcgcggcatcggcgcgcgcacgctggaaacg
ctggccgacgcggcccgcacccatgacatcagcctgtattcggcagtggccatggtgggc
ggcaagggcggttccaacctggtgcagttcgcccagctcatcaaccgcctgatcgaggaa
acgcgcgacctgccgctgcccgagatggtcgagcacatgctcgaggccagcggcctgaac
gcccattacaaggccgagcgcgaaggcgccgagcgcctggaaaacctgaacgaactgatc
accgccgcggccgtgttcgcgtccgaggaaaattacgacggcatgcccgccggcgtggtg
ccccagaccgatgcgtcctcgacgctgatgccgggcgtggtcgacgcgcccatcgtcgcg
ccggacggcatgacgccgctggcggccttcctgtcgcacgcggcgctggaagccggcgac
aaccaggcgcagcagggccaggacgcggtccagctcatgacggtgcatgccgccaagggc
ctggagttcgacgcggtcttcatcaccggcctggaagagggcctgttcccgcacgagaac
agcatcctcgaacaatccgggctggaagaggaacggcgcctgatgtacgtggcgatcacg
cgcgcgcgacagcgcctgtacatcacgctggcgcagagccgcatgctgcatggacagacg
cgctacgccatgcgttcgcgcttcctggaagaaatccccgagaagcacctgaagtggctg
acgcccaaggccggcctggcccaggcgggcgcctcgcaggcgtcctggggcggcagccgc
accgacgcgttcggccgcaagcccaccaacacgattgcgccgcgtcaaccgcgcggcgtc
gccaccggcgtcaccgtgggcgacaagcagtatcgtgtgggccagggcgtgcatcacgcg
cgtttcggcgacggcaccatcatcggtctgagcgggtcggggcaggatgcccaggccgag
atccagttccgcgacgtgggcgccaagacgttggcgctgggcatcgccaaactcgacata
gtccagggttga
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