Achromobacter sp. AONIH1: C2U31_26005
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Entry
C2U31_26005 CDS
T05288
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
achr
Achromobacter sp. AONIH1
Pathway
achr03420
Nucleotide excision repair
achr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
achr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C2U31_26005
03430 Mismatch repair
C2U31_26005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
achr03400
]
C2U31_26005
Enzymes [BR:
achr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C2U31_26005
DNA repair and recombination proteins [BR:
achr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C2U31_26005
MMR (mismatch excision repair)
Other MMR factors
C2U31_26005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
HHH
Motif
Other DBs
NCBI-ProteinID:
AUT49145
UniProt:
A0A2I8DPE2
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All DBs
Position
complement(5702664..5704787)
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AA seq
707 aa
AA seq
DB search
MSDTQSPSSSAPQDRPDPLADLNPAQRAAVEFGVAPARAGQGGGEDGPLLVIAGAGSGKT
NTLAHRVAHLILNGADPQRMLLLTFSRRAALEMERRVGAVLHRVMRLHAAQQPPALPWAG
TFHAIGARLLRDCALRIGLSESFTILDRGDAEDLMGMVRHELGQSSAKSRFPLKGTCLAI
YSRVINSQAPVEDVLKTAFPWCAQWEAELKALFRAYVAAKQDQQALDYDDLLLYWAEMMG
DPGIAADVGARFDHVLVDEYQDTNRLQSAILLAMKPDGRGLTVVGDDAQSIYSFRAATVR
NILDFPTQFPKPARVVTLDRNYRSTQPILNASNAVIGLAAERYAKDLWTDRQSSQLPEMV
NVSDEAGQARWVADQVLAQREAGATLKSQAALFRSASHSAALELELTRRNIPFVKFGGLR
FLEAAHIKDLLSLLRWAENPRGRMAGFRVAQLLPGVGPATAGKLMDAMSASAEPLAALRA
FKPGAAAQQDWGAFADTYAALRDPALKWPADVDLALRWYAGQLERLYDDARVRRADLEQL
ARIAAGYPSRERFLTELTLDPPDATSDESGAPLRDEDYMILSTIHSAKGQEWKSVYVLNV
VDGCIPSDMSTGTAEEIEEERRLLYVAMTRARERLQLVVPQRFYVHQQTGMGDRHVYASR
TRFITNAMLPLFDHLPKAPPLPEGNGAGPSPQAPGIDVARRVRGLFS
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatacgcaatccccgtcttcatcagcgccgcaggaccgtcccgatcccctggcg
gacctcaaccccgcccagcgcgcggcggtggaattcggcgtggccccggcccgcgccggg
cagggcggcggcgaggacggcccgctgctggtgatcgccggcgccggttcgggcaagacc
aatacgcttgcccaccgcgtggcccatctgatcctgaacggcgccgatccccagcgcatg
ctgttgttgaccttctcgcgccgcgccgccttggaaatggagcgccgcgtgggcgcggtg
ctgcaccgggtgatgcgcctgcatgcggcgcagcagccgccggccctgccctgggcgggc
accttccatgccattggcgcgcgcctgctgcgcgattgcgcgctgcgcatcggcctgtcc
gagtccttcaccatcctggatcggggcgacgccgaggacctgatgggcatggtgcgccac
gagctgggccagtcctcggccaagtcgcgctttccgctcaagggcacctgcctggccatc
tattcgcgcgtgatcaacagccaggcgccggtggaagacgtgctcaagaccgcctttccg
tggtgcgcgcaatgggaggccgagctcaaggccctgttccgcgcctacgtcgcggccaag
caggaccagcaggcgctggattacgacgacctgctgctgtactgggccgagatgatgggc
gatcccggcatcgcggccgatgtgggggcgcgctttgaccatgtgctggtcgacgagtac
caggacaccaatcgcctgcaatccgccatcctgctggccatgaagccggacgggcgcggc
ctgaccgtggtgggcgacgacgcgcagtcgatctattccttccgcgcggccaccgtgcgc
aacatcctggactttcccacgcagtttccgaagccggcgcgcgtggtcacgctggaccgc
aactaccgttccacccagcccatcctgaacgcgtccaacgccgtgatcggattggcggcg
gagcgctatgccaaggatctctggaccgaccggcaatcctcgcagctgcccgaaatggtc
aatgtcagcgacgaggccgggcaggcgcgctgggttgccgaccaggtgctggcgcagcgc
gaggcgggcgccacgctcaaatcgcaggcggcgctgttccgttcggccagccatagcgcg
gcactggaactggagctgacgcggcgcaatatccccttcgtgaaattcggcggactgcgc
ttcctggaggcggcccacatcaaggacctgctgtccctgctgcgctgggccgagaatccg
cgcggccgcatggcgggcttccgggtggcgcagctgttgccgggcgtcggtccggccacg
gccggcaaactgatggatgcgatgtcggcctcggccgagccgctggcggccctgcgcgcg
ttcaagccgggcgcggcggcgcagcaggactggggcgccttcgccgacacctatgccgcg
ctgcgcgatcccgcgctgaaatggcccgccgacgtggacctggccttgcgctggtatgcg
ggccagctcgaacggctgtacgacgatgcgcgcgtgcgccgcgccgacctggaacagctg
gcccgcatcgcggccggctatccgtcgcgcgaacgcttcctgaccgagctgacgctcgat
cctccagacgccaccagcgacgaatcgggcgcgccgctgcgcgacgaggactacatgatc
ctgtccaccatccattccgccaagggacaggaatggaaatccgtgtatgtgctgaacgtg
gtggacggctgcattccgtcggacatgagcaccggcacggccgaggaaatcgaggaagaa
cgccgcctgctgtacgtcgccatgacccgcgcgcgcgaacgcctgcagctggtcgtgccg
cagcgtttctacgtgcatcagcagaccggcatgggcgaccggcatgtgtatgcgtcacgc
acgcgcttcatcaccaacgccatgctgccgctgttcgatcacctgcccaaggcgccgccg
ctgcccgaggggaacggcgcgggcccgtcgccgcaggcgccgggcatcgatgtggcgcgt
cgggtgcggggcctgttttcctag
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