Achromobacter sp. AONIH1: C2U31_27820
Help
Entry
C2U31_27820 CDS
T05288
Name
(GenBank) nuclease
Organism
achr
Achromobacter sp. AONIH1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
PPL5
DEAD
Motif
Other DBs
NCBI-ProteinID:
AUT49463
LinkDB
All DBs
Position
complement(6099918..6103367)
Genome browser
AA seq
1149 aa
AA seq
DB search
MAEQERLPHDHAARAEALDPLRSFLVQAPAGSGKTELLTDRILALLATVNRPEEIVAITF
TRKAASEMHARVLSKLRRGLEPMPEPMHERRSWELARDALARNDELGWHLLEHPARLAIR
TIDSFCAGLVRSMPWLSELGGMPEITDDARAHYEAAARATLDLADDFEEVRILLEHLDVD
VQAAKDAIADMLGQRDQWLPLLAHGSDRESMEEWLADAIGEDLLALSDAMPLGWAEALSG
PARLAATQLQEGGEDNKLAALLDWTDELPPDAFALDAWRALAHLLLTGTGSLRKTVNKNL
GFPAKCAHKEPFVAWLEGADADAPWVRRLDAARDIPDPAFTDAQWRVLGAQLMTLKLAVA
QLRLRFSDTGEIDFIEIAQRAASALGHADDPGELLLKLDASIRHLLIDEFQDTSQTQLDL
LNTLTSGWQEGDGRSLFLVGDPMQSIYRFRKAEVRLFLQVKEEGVGLLQPEFLNLTDNFR
SQAGVVNWVNRSFVGLMPRSNDPIAGAIAYSASTAFHDALPGTAVEFHPAWSRGDAEAAE
QQAEDIAVTLVRQALKEHKGSKHPVAVLVRARSHLGNLTRRLTQEGISCRAVDLVPLALR
PVVADLVQLLRALSHPADRLAWLSVLRAPFCGLTLTSLQRLFGEDHVTPVPVLLERALRE
PDPESAASQTPVQGSLFDAPPAVREDEGRAGPRARDVLGADEYERLRQAAAVLLDARNDS
GAMPFAAWVEACWRRLGGPALYTGLSVANDAESLFQLVERLAPHGAIDMAALEAGIARLF
AAPDAAGEDGAVEIMTMHKSKGLQFETVILYGLHRAPRGDQAPLVRFEQNADRVLFGPVK
PRAETEADPVSRYLGAREARRASYEVDRLLYVAATRARKRLHLVGHVSVDDAGQAKAPPA
ASLLGRLWPWLTPPEPPAREGEAARQADDGPEWQGDPLRRISAAGLAQLAGRAEPSFSPG
FSAGARDGWGDAAEHPAWQLEAGYDAAIGTLAHAWLERIGRDGIAAWPATALASRLSAMR
RQLTRAGIPASQADAAAEAVLETLQATLSDPRGQWLLSQSGARREWPLIDAAGKVSVIDL
ALSTEDGWLIVDYKTGRSQPGESAEAFAARMRQRHGEQLRRYCAQVTALDGRPTRAALYF
PRARAWIDL
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atggcggaacaagaacgcctgccccacgaccacgccgcgcgcgccgaggcgctggacccg
ttgcgctcgttcctggtgcaggcgccggcgggatccggcaagaccgagctgttgaccgat
cgcatcctggcgctgctggccacggtgaaccggcccgaggaaatcgtggccattaccttc
acgcgcaaggccgcctcggaaatgcacgcgcgcgtgctgagcaagctgcggcgcggcctg
gagcccatgcccgagcccatgcacgagcgccgcagctgggaactggcgcgcgacgcgctg
gcgcgcaacgacgagctgggctggcatctgctggagcacccggcgcggctggccatccgc
accatcgactcgttctgcgccggcctggtgcgcagcatgccctggctgtccgagctgggc
ggcatgccggagatcaccgacgacgcgcgcgcgcactacgaggccgcggcccgcgccacg
ctggatctggccgacgatttcgaggaagtccgcatcctgctggaacacctggatgtggac
gtgcaggccgccaaggacgccatcgccgacatgctcggccagcgcgaccagtggctgccg
ctgctggcccacggttcggaccgcgagagcatggaggaatggctggccgatgccatcggc
gaggacttgctggcgctgtccgacgccatgccgttgggctgggccgaggcgctgagcggc
ccggcgcggctggccgcgacgcagctgcaggagggcggggaagacaacaagctcgcggcg
ctgctcgattggaccgacgagctgccgcccgacgcctttgcgctggacgcgtggcgcgcg
ctggcccatctgctgctgaccggcaccggctcgttgcgcaagacggtcaacaagaacctg
ggctttccagccaagtgcgcgcacaaggaacccttcgtcgcctggctcgaaggcgccgat
gccgacgcgccatgggtgcgccggctggatgccgcgcgcgacattcccgatcccgccttc
accgacgcgcagtggcgggtgctgggcgcgcagctcatgaccttgaagctggcggtggcg
cagctgcggctgcgcttctccgacacaggcgaaatcgacttcatcgagatcgcccagcgc
gcggcgtcggcgctgggccatgccgacgatcccggcgaactgctgctgaagctggatgcc
tcgatccgccatctgctgatcgacgagttccaggacaccagccagacgcagctggacctg
ttgaacacgctgacctcgggctggcaggaaggggacggccgcagcctgttcctggtcggc
gacccgatgcagtcgatctaccgcttccgtaaggccgaggtgcgcctgttcctgcaggtt
aaggaagagggcgtgggcttgctgcaaccggaatttctgaacctcaccgacaacttccgt
tcgcaggccggcgtggtgaactgggtgaatcgttccttcgtcggcctgatgccccgcagc
aacgatccgatcgcgggcgccatcgcctacagcgcgtcgacggcctttcatgatgcgctg
cccggcacggccgtcgagttccatcccgcctggtcgcggggcgacgccgaggccgccgag
cagcaggccgaggacatcgcggtgacgctggtgcggcaggcgctcaaggaacacaagggc
agcaagcatccagtggcggtgctggtgcgcgcgcgcagccatctgggcaacctgacgcgc
cggttgacgcaggagggcatcagctgccgcgcggtggacctggtgccgctggccctgcgg
ccggtggtggcggatctggtgcaactgctgcgggcgctgtcgcatccggccgaccggctg
gcctggctgtcggtgttgcgcgcgccgttctgcggcctgaccctgacctcgctgcaacgc
ctgttcggcgaggatcacgtcacgcccgtgcccgtgctgctggagcgcgcgctgcgcgaa
ccggatccggagtcagccgcctcgcagacgcccgtacagggctcgctgttcgacgcgccg
cccgctgtgcgggaggacgagggccgggccggaccacgcgcgcgcgacgtgctgggcgcg
gacgagtacgaacgcctgcgccaggccgccgccgtcctgctggacgcgcgcaacgattcc
ggcgccatgcccttcgcggcctgggtcgaggcctgttggcgacgcctcggcggtccggcg
ctgtacacggggctgtccgtcgccaatgacgcggaaagcctgttccagctggtcgagcgc
ctggcgccgcacggcgcgatcgacatggccgcgctggaagccggcatcgcgcggctgttc
gccgcgcctgacgcggctggcgaggacggcgcggtcgagatcatgaccatgcacaagtcc
aagggcctgcaattcgagacggtcatcctttatggtctgcaccgcgcgccgcgcggtgat
caggcgccgctggtgcgcttcgagcagaacgccgaccgggtgctgttcggcccggtcaag
ccgcgcgccgagaccgaggccgatcccgtgtcccgctacctgggcgcgcgcgaggcgcgc
cgcgcgtcctatgaggtggaccggctgctgtacgtggccgccacgcgcgcgcgcaagcgc
ctgcatctggtcggccatgtgtcggtggacgacgccggacaggccaaggccccgccagcg
gccagcctgcttggccgcctgtggccctggctgacgccgcccgagccgccggcgcgcgag
ggcgaggccgcgcgccaagccgacgacggcccggaatggcagggcgatcccctgcgtcgc
atctccgccgccggactggcgcagctggccggccgcgccgagcccagtttcagcccgggc
ttctcggccggcgcgcgcgacggctggggcgacgcggccgagcatcccgcctggcagctg
gaggccggctatgacgccgccatcggcacgctggcgcacgcctggctcgaacgcatcggc
cgcgacggcatcgccgcctggccggccacggcgctggccagccgcctgtccgccatgcgg
cgccagctgacccgcgccggcatccccgccagtcaggccgacgcggccgccgaagccgtg
ctggaaacgctgcaggccaccttgtccgacccgcgcggccaatggctgctgtcccaatcc
ggtgcgcgccgagaatggccgctgatcgacgccgccggcaaggtctccgtcatcgacctg
gcgctcagcaccgaggacggctggctcatcgtcgactacaagaccggccgttcccagccc
ggcgaatccgccgaggcctttgccgcgcgcatgcgccaacgccacggcgagcagctgcgc
cgctactgtgcccaggtcaccgccctggacggccgcccgacccgtgccgcgctgtacttc
ccccgggcgcgcgcgtggatagacctttga
DBGET
integrated database retrieval system
