Anaerocolumna chitinilytica: bsdcttw_02290
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Entry
bsdcttw_02290 CDS
T07655
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
acht
Anaerocolumna chitinilytica
Pathway
acht03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acht00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
bsdcttw_02290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acht03019
]
bsdcttw_02290
03009 Ribosome biogenesis [BR:
acht03009
]
bsdcttw_02290
Enzymes [BR:
acht01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
bsdcttw_02290
Messenger RNA biogenesis [BR:
acht03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
bsdcttw_02290
Ribosome biogenesis [BR:
acht03009
]
Prokaryotic type
rRNA helicases
bsdcttw_02290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
CobA_CobO_BtuR
Cas3-like_C_2
AAA_30
PolC_DP2_N
UBA_7
Helicase_RecD
Hyccin
Motif
Other DBs
NCBI-ProteinID:
BCJ97188
UniProt:
A0A7I8DFC3
LinkDB
All DBs
Position
272264..273856
Genome browser
AA seq
530 aa
AA seq
DB search
MQTVKFEELGISEQILKAIVEMGFEEASPIQANAIPVMLEGKDIVGQAQTGTGKTAAFGI
PLLETIDPKSKHLQAVVLSPTRELAIQIADEIRKLATFMHGIKVLPIYGGQDITKQIRSL
KAGTQIVIGTPGRVMDHMRRKTVKFDEVKLVVLDEADEMLNMGFREDIETILKDTPEERQ
TVLFSATMPKPIMDIAKTYQKDAQIIKVVKKELTVPKIEQYYYEVKPKNKDEVLCRLIDM
YDPKLSLVFCNTKKQVDELVSVLQGRGYFAEGLHGDLKQQQRDRVMHSFRNGKTEILVAT
DVAARGIDVDDVEAVFNYDVPQDDEYYVHRIGRTGRAGRTGRAFTLIVGKEVYKLKDIQR
YCKTKILAQPIPSINDVTAVKAEKILDRVQKIIADEDLTKMIEIIEERVNAEDCTALDIA
AAFLKMSMGDENEQIEEKASFEDYGDTGAEAGMVRLFINIGKKQNTRPGDILGAIAGETG
MPGKLIGSIDMYDKYTFVEVPREYAGDVIQVMKDAKIKGKSINIEPANKK
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgcagacagttaaatttgaagaattaggaattagtgagcagattttaaaggctattgta
gaaatgggctttgaagaagcctctcctatccaggccaatgccataccggttatgctggag
ggaaaggatattgtaggtcaggcacagaccggtacaggtaagacagcagcttttggaata
ccgctgttagaaaccattgaccccaagagtaaacatttacaggcagtggttttaagccct
accagagagttggctatacagatagcagatgaaatcagaaaacttgctacttttatgcat
gggataaaagttcttcctatatatggtggacaggatattacaaagcagattcgttcctta
aaggccggaacccagattgttatcggtacaccgggtcgtgtaatggaccacatgagaaga
aagacagttaagtttgatgaagtaaagcttgttgtcctggatgaagcagatgagatgtta
aacatgggattccgtgaggacatcgagacaattttaaaggatacaccggaagaaagacag
acggttttattctctgcaaccatgccaaagcctattatggacattgcaaagacctaccag
aaagatgctcagattatcaaggtggtaaaaaaggaacttacggttccgaagattgaacag
tattattatgaagttaagcctaagaacaaggacgaagtgctttgcaggctgattgatatg
tatgatcccaaactctctctggtattttgcaataccaagaagcaggtggatgaactggta
tctgtgctccagggaagaggatattttgcagaaggacttcacggtgatttgaagcagcag
cagcgtgaccgtgtaatgcacagcttccgtaatggtaagacagagattctggttgcaaca
gacgtagctgccagaggaattgatgtagacgatgtagaagctgtatttaactatgatgtg
cctcaggatgacgagtattatgtacaccgtatcggaagaaccggaagagcaggaagaacc
ggcagagcttttactcttatcgtaggaaaagaagtatacaagttaaaggatatccagaga
tattgcaagactaagattttagcgcagcctataccatccataaacgatgttactgctgta
aaagctgaaaaaatcttagaccgtgttcaaaaaatcattgcagatgaagatttaacgaag
atgatagaaatcattgaagagagagttaatgcagaggattgtacagcacttgatattgca
gctgctttcttaaagatgtcaatgggtgatgagaatgaacagattgaagagaaagcatcc
tttgaagactatggagatacaggagcagaagccggaatggtaagactctttatcaacata
ggaaagaagcagaatacaaggccgggagacattctgggggcaattgccggagagaccgga
atgcctggtaaattaatcggttctattgatatgtatgataaatacaccttcgttgaggtt
ccgagagaatatgccggagatgttatccaggtaatgaaagatgctaagattaaaggcaag
agcattaacatagagccagctaataaaaagtaa
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